| Annotation |
|---|
| Description | jgi|Araly1|495758|fgenesh2_kg.8__1574__AT5G56680.1 |
| Sequence |
GTGCTTTTGG TTTCGTAGAT CACGAACAAT GGCTGATGAG ATTGTGCCTC CGGCGAATCA ATTAGCCGCA GTATCCTTGG GTAACGACGG ATCTACGGTG CAAAAAGCTC AATTTTCGAA CCGGGTTTTG ATTCGAACCA TTTTGGATCG ACCTGACGGC GGAGCTAAAC TCGCCGGTCA GAAAATTCGA ATCGGTGGTT GGGTTAAAAC CGGAAGAGAG CAAGGGAAAG GAGCTTTCGC TTTCCTTGAG GTTAACGATG GATCTTGTCC AGCGAATCTT CAGGTTATGG TGGATTCGTC TTTATATGAT CTCTCTAAGT TGGTTGCGAC GGGAACTTGT GTTACTGTTG ATGGAGTTTT GAAGGTTCCA CCGGAAGGTA AAGGTACGAA GCAGAGGATT GAGCTTAGCG TTGTGAACGT GATTGATGTT GGAACTGTGG ATGCGACTAA GTATCCACTT CCTAAGACTA AGTTGACTCT TGAGTTTTTG AGAGATGTGC TTCATCTTCG ATCCAGGACT AACTCAATCT CTGCAGTTGC CAGAATCCGT AATGCGCTTG CTTTTGCGAC CCATAGTTTC TTTCAAGAAC ATAGTTTCCT TTACATTCAC ACTCCTATCA TTACAACAAG TGATTGTGAA GGTGCTGGTG AAATGTTCCA AGCAACAACC TTGATCAATT ACACTGAGAA GTTGGAGCAG GATCTCATTG ATAACCCTCT GCCTACTGAG GCTGATGTCG AAGCTGCGAG GCTCATTGTT AAGGAGAGAG GTGATGTTGT AGCGCAACTG AAAGCTGCCA AAGCAAGCAA GGAAGAGATC ACTGCTGCTG TTGCTCAACT TAAAATAGCA AAGGAGAGTT TTGCTCATAT TGAAGAGAGG TCAAAGCTTA AGCCTGGACT ACCTAAAAAA GATGGAAACA TTGATTATTC CAAGGATTTC TTTGGCCGTC AAGCTTTCTT GACAGTTTCG GGGCAATTAC AAGTGGAGAC GTATGCTTGT GCTCTTAGCA GTGTGTATAC ATTCGGCCCG ACTTTCCGGG CAGAGAACTC GCACACTTCA AGGCATCTAG CTGAATTCTG GATGGTTGAG CCTGAAATTG CTTTTGCAGA TCTAGAGGAC GACATGAACT GTGCAGAGGC GTATGTGAAA TACATGTGCA AGTGGTTGCT GGATAAATGT CGCGATGACA TGGAACTTAT GGCTAAGAAT TTCGACTCAG GATGCATTGA CAGGCTAGAA TTGGTTGAAT CAACTCCGTT TGGGCGTATA ACATACACTG AAGCAATAGA GCTACTTGAG GAAGCTGTGG CTAAAGGAAA GGAATTTGAT AACAAAGTTG AGTGGGGAAT CGACTTAGCT TCGGAGCATG AAAGATACTT GACAGAGGTT TTGTTTCAAA AGCCACTTAT TGTCTATAAC TACCCGAAAG GAATCAAAGC TTTTTACATG AGACTTAACG ACGATGAGAA GACTGTTGCA GCCATGGATG TCCTCGTTCC AAAGGTTGGA GAACTCATTG GTGGAAGCCA AAGGGAAGAA CGATATGATG TCATAAAAAA GAGGATTGAG GAGATGGGTC TACCAATAGA GCCATATGAG TGGTACCTAG ACTTGCGCCG ATATGGAACA GTGAAGCATT GTGGATTTGG ACTTGGCTTC GAACGTATGA TTCTGTTCGC TACAGGAATT GATAACATCA GAGATGTTAT TCCTTTCCCT CGCTATCCTG GAAAAGCTGA TCTTTGATTC CTCTTCTTTA CACCATTTAC AAACACAATT TCGATTGTTT TTTATTAGCT GGTCTGGTTT TGATAACCGA CTTGGTTTTA GTTTACTTTT AAAGTTGGTT AAATGAAAAT TGTATGGTTT TTGACTTTTG ATTTTATATC TCTATGGATC TGCTTTTGTT CGGTTATCCC GATTG |
| Length | 1925 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 16606421.. 16608825 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G56680.1 |
| Description | Class II aminoacyl-tRNA and biotin synthetases superfamily protein |
| TAIR curator summary | Encodes a putative cytosolic asparaginyl-tRNA synthetase. |
| Alias | [EMB2755][SYNC1][SYNC1 ARATH][EMBRYO DEFECTIVE 2755] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg945361 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 3.16228 |
Ahg478740 | mitogen-activated protein kinase kinase kinase 7 |
| 3.4641 |
Ahg927697 | Proteasome component (PCI) domain protein |
| 6.48074 |
Ahg928962 | actin-related protein 5 |
| 7.2111 |
Ahg949921 | myosin heavy chain-related |
| 8.48528 |
Ahg945574 | DNA-binding storekeeper protein-related transcriptional regulator |
| 10 |
Ahg943901 | phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative |
| 11.0454 |
Ahg943318 | damaged DNA binding protein 1A |
| 12.4097 |
Ahg322676 | nonsense-mediated mRNA decay NMD3 family protein |
| 12.6491 |
Ahg329184 | MA3 domain-containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|