Detail



ID : Ahg486617

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486617|fgenesh2_kg.5__2609__AT3G61420.1
Sequence
ATGTTGCTTT TTGTCCCAAA TGATCCTAAA TCAGATTTGA AGCTTAAAGT TCAGACTCAC AACATCAAAA GTCAGAAATA TACCAAACAA GGATCAAATA AACCTCCTTG GCTCAATCTG ACCAATAAGC AGGGAAGGAG TCATATCTTT GAGTTTGAAA ATTATCCCGA CATGCATGCT TGTCGAGATT TCATCACTAA GGCCCTTGCT AAATGTGATG AGGAGTCTAA TAAATCAGTT GTCTCTACAC CTGCTGAGCA ACTTAGTATG GCAGAATTTG AGCTACGCTT CAAGCTTCTT CGAGAAAATA GTGAGTTGCA GAAATTGCAT AAGCAATTTG TGGAAAGTAA AGTCCTGACG GAAGACGAAT TCTGGTCTAC AAGGAAGAAA TTACTTGGTA AATATTCCAT TAGAAAGTCA AAACAACAGA TGGGGCTTAA AGGCATGATG GTTTCAGGCA TCAAACCATC TTCTGATGGG CGGACTAATC GGGTGACGTT TACCTTAACG TCTGAGATAA TTTTTCAGAT TTTTGCTGAG AAGCCGGCTG TCCGGCAGGC ATTCATAGAT TATGTTCCGA AAAAGATGAC AGAAAAGGAC TTCTGGACAA AATATTTTAG AGCAGAATAT CTTTACAGCA CAAAAAATAC AGCAGAAGCT GCTGAGGATG AGGAACTCGC TGTCTTTCTG AAGCCTGACG AGATATTGGC TCGGGAAGCT CGTCAAAAGA TGAGACGGGT TGATCCAACT CTTGACATGG ACGCTGACCA GGGAGATGAC TACACTCATC TTATGGACCA TGGGATCCAG CGCGATGGCA CCAATGACGC TGTTGAACCA CAGAATGACC AGCATAGGAG GTCACTTTTA CAAGATCTTA ATCGCCATGC TGCTGTTGTA TTGGAAGGAA GATGCATCGT AGATGTTGAG TCAGAAGAGA CGAGGATTGT TGCAGAGGCT CTCACACGGG CGAAACAAGT AAGCAAAGCT AACCAGGAGA GGTTGGAGAG AATGTCCCGT GCAGCAGAGA TGGAGGATCT TCAAGCACCA CAAAACTTCC CACTAGCCCC CCTCTCTATC AAGGACCCTC GTGATTACTT TGAATCTCAA CAAGGAAACG TCCTCAGTGA ACCCAGAGGA GCAAGGGCAT CAAAGAGAAA TGTATATGAA GCTTATGGAT TACTAAAAGA ATCCATTTTG GAGATTAGAA TGACGGGATT AAGTGATCCG TTGGTTAAAC CTGAAGTTTC CTTTGAGGTT TTCAGTTCGT TGACCCGAAC TATCTCAACT GCCAAAAATA TTATCGGGAA GAACCCACGG GAGAGCTTTC TGGACAGATT ACCAAAGTCC ACTAAGGATG AAGTTATACA TGATGTTATA TTTAATCATG CAGCAACTCC GAGTAATCCT TGTAGTCGAA ACTTAACCGC ATATGGTCTA ATGTGTATGG CAATGAAACA GTCGGTGCAG TCTGATCTCC GGCATCAGGT TTCGTTACTA GTTCGTTCAA TGCAACAGGC TCTTGATGCT GCGTTCCAAC ACTACGAATC GGACTTGCAG AGAAGAACCG CTAAGATTGC ATAA 
Length1584
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19148168.. 19152636
Download Sequence
A.thaliana
AGI-codeAT3G61420.1
DescriptionBSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.28011 Ahg491556 ATP-dependent caseinolytic (Clp) protease/crotonase family protein
9.8995 Ahg939225 SET domain protein 14
16.4317 Ahg931905 myb-like HTH transcriptional regulator family protein
20.8567 Ahg931587 Uncharacterised conserved protein (UCP030210)
22.6495 Ahg481687 TATA-binding related factor (TRF) of subunit 20 of Mediator complex
31.749 Ahg489556 Protein of unknown function (DUF1624)
36.8511 Ahg487392 deoxyhypusine synthase
49.3153 Ahg935028
50.9902 Ahg934404 conserved peptide upstream open reading frame 52
52.3068 Ahg900061 ATP-dependent caseinolytic (Clp) protease/crotonase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression