Detail



ID : Ahg939225

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939225|scaffold_503416.1
Sequence
AAGAGAGAGT TATATAACTG ATGCGCCACG TCGGATTTGA GCAAAAGCCA GTTTTCGATT TGGCGCTCTT GTACAATCTG AAGCGGTGCA AAATTGATTC AGAAATTGAG TATGGGAGCA AAAAGGGTGA GATTATGGTG TATAAGAAGA GACAAAGAGC AACCGTGGAT CAACCATGTA GTAGAGAACC CGAAGTTCAT ACAAGTAGCT CAAGCTCCTT GACCAGCAAA GAATCTCAAC AAGTTTGCTC TGACCACTCC AAGTCTTCGC GTGGCAGAGT TCGAGCGGTT CCTTCAAGGT TCAAGGACTC CATTGTTGGT TCATGGAAAT CTAGCCGTCG CAAGGAAGAG TCGACGGATT CTAGTCATGA TGACGACGTG AATCTGGGGA AGAAGGTCAA AGGTTTCAGT GGAAGCTCGA AATTGCATCG AAGCAAAGAC TCGAAGCTGT TTCCACATAA GGATAACGGA GACAGCAGCG AAGTAGATTG CGATTACTGG GATGTTAAAA TTTCCATGTT GTCTTCCTCC GACGATGCTA ATTCTGGTAT GCCGAAAAAG TCTGACGTGT ACAAACCAGC ATGGCCGGCT ATGGTGGTCG ATCCGATATC ACAAGCGCCT GATGGGGTCT TGAAACATTG CGTCCCAGGC GCAATTTGTG TCATGTTTTT TGGGTACTCG AAGAATGGAA CTCAGAGGGA CTATGCATGG GTCAGACAAG GAATGGTGTA TCCATTTACG GAGTTTATGG ACAAATTTCA GGACAAGACA AACTTGTACA ATTACAAGCC AAGTGAATTT AAGAAGGCAC TTGATGAAGC AGTTTTAGCA GAAAATGGGG TCGAGGGTAA TTGTGGAGAT GCTGAAATCA GCTGCCCAGA TTCCTCTGCG ACGGAATCCG ACCAGGACTA TGGACCTGCT TCTAGAATAC AGGCACGGTC ACAACCTGAA GAGCTTTTAT GCAAACACTG TTCAAAGGAA TTGAATCCAA ATTGGTTGTT TCAGTTGCGG AAATCCAATC AGTATTGTGG CATTTGCAAG AGAATGTGGC ACCCTTCAGA TGATGGAGAT TGGGTTTGTT GTGATGGGTG TGATGTATGG GTACATGCTG GGTGCGACAA CATTTCAAAT AAGCACTTTA AGGAACTGGA GCACAACAAT TACTATTGCC CTAATTGTAA AGTCCAGCAT GAGCTTGCGC CATCAATATT AGAAGAACAG AACTCAGTGT TCAAGTCTAC AAAAAAGGCG ACAGAGACTG AGCTGCGTGA TGAGGTTACT GTAGTCTGTA ATGGCATGGA AGGAACATAT ATCAGAAAAT TTCATGCAAT TGAGTGCAAG TGGGGTTCAT GTGGGTCAAG GAAGCAGTCA CCAAGTGAAT GGGAAAGGCA TACAGGCTGC AGAGCCAAAA AGTGTAAGAG TGAAAGACAC AATGCTACCT CTAGAAAAAT GGAAACCCAG ATGTTAGATA AGCAGAAGAT GCTCTCTTTG CTGGAAGTGC TAAGTGGACG TGAAAGATGT GCTGTATGCA GATGGGTAGA AGACTGGGAA GAAAATAAAA TGATCATCTG TAACAGATGT CAAGTGGCTG TGCACCAAGA ATGCTATGGG GTAAGCAAAT CTCAGGACCT CACCTCCTGG GTGTGCAGAG CATGTGAAAC ACCAGATATT GAGAGAGACT GTTGTCTTTG TCCTGTTAAA GGTATTACTG CAGAATTAGC TCTCTTCATG ATTTTTTTTC CCCTATCTTG CATTAGTAAT TATTTATTCT TGACTGTTCT GTCACAAGGC CAAGTTAAGT ACACTCGTTC ACAAGCGCCT ACTGCGGTCT TGAAACATTG CGTCCCGGGC GCGATATGTG TCATGTTTTT TGGGTACTTG AAGAATGGAA CTCAGAGCGA CTATGCAAGG GTCAGACAAG GAATGATGTA TCCATTTACG GAATTTATGG ACAAGTAAGT ACACGAGACG CTCTTTCTGG 
Length1980
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT3G61740.1
DescriptionSET domain protein 14
TAIR curator summary
Alias[ATX3][SDG14][SET domain protein 14]
Gene coexpression
MR
MR Locus Description
2 Ahg939245 SET domain protein 14
9.16515 Ahg945962 calcium-dependent protein kinase 15
9.8995 Ahg486617 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)
28.8444 Ahg929332 metallothionein 3
30.133 Ahg493056 MEI2-like 3
32.4962 Ahg482928 tetratricopeptide repeat (TPR)-containing protein
35.4965 Ahg949042 rotamase FKBP 1
39.3446 Ahg359372 phosphatidylserine decarboxylase 2
39.4968 Ahg486057 Sodium Bile acid symporter family
43.0465 Ahg479493 Vacuolar sorting protein 9 (VPS9) domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression