| Annotation |
|---|
| Description | jgi|Araly1|486779|fgenesh2_kg.5__2771__AT3G62770.2 |
| Sequence |
GGCAACAAGC AAAGCACGAA GTCATCTTCT TCTTCCTATT TCTCTATTCC TCCTTCTCCA CGCTTCTTCT TCTTCTTCCT CAATCTCTCT TACGATTCCT TCGAATTCCT TCTTCCATGG CCACCGTCTC TTCTTCCTCC TGGCCAAACC CCAACCCTAA TCCCGATCCC ACGTCTGCCT CAGATTCCGA TTCTACTTTT CCCTCTCACC GCGTTCGCGG AGACGAAACC GACTCTCTCG ATTCCTTCTC CTCCATGAGT CTCAACTCCG ACGAGCCTAA TCAGAACTCT AATCAATCGC CTATTTCTCC CCCTACGCCC AATTTACCGG TGACGCCTCC TCCGTCCGTG CTTCATCTTT CCTTTAACCA GGACCATGCT TGCTTCGCTG TCGGCACTGA TCGTGGCTTC CGGATCCTTA ATTGCGATCC GTTTCGCGAG ATTTTCCGGC GTGATTTCGA TCGTGGCGGT GGTGTTGCTG TGGTGGAGAT GCTTTTCAGA TGCAATATAT TAGCCCTAGT GGGTGGTGGA CCTGATCCTC AATATCCTCC TAATAAGGTT ATGATTTGGG ATGATCACCA GGGCCGATGT ATCGGAGAGC TCTCTTTCAG GTCCGATGTT AGATCGGTCC GGCTTAGGAG GGATCGGATT ATTGTCGTTC TGGAGCAGAA GATTTTTGTG TACAATTTCT CCGACCTCAA GCTGATGCAT CAGATTGAGA CCATTGCGAA CCCTAAGGGT TTGTGTGCTG TTTCTCAGGG TGTTGGTTCT ATGGTATTGG TATGTCCAGG TTTGCAGAAA GGTCAAGTTC GGATCGAGCA CTACGCTTCT AAACGGACCA AATTCGTCAT GGCTCATGAT TCGAGAATAG CTTGCTTCGC TCTCACGCAG GATGGGCATT TGTTGGCAAC AGCTAGCTCT AAGGGTACTC TGGTTCGGGT CTTCAATACT GTTGATGGAA CCTTGCGCCA AGAGTCCCAC CGTGATGTGA CTCTACAGGT TAGGAGGGGT GCGGATAGAG CGGAGATCTA CAGTTTGGCC TTCTCTTCAA ATGCTCAGTG GTTAGCTGTC TCAAGTGACA AAGGAACGGT CCATGTCTTT GGTCTCAAAG TCAACTCCGG ATCTCAAGTG AAAGACTCAT CCCGAATTGC ACCTGATGCT ACTCCCTCAT CCCCATCGTC ATCTCTGTCT TTATTCAAAG TGTTACCAAA GTATTTCAGC TCGGAGTGGT CGGTGGCTCA GTTCAGGTTG GTTGAAGGAA CTCAGTACAT AGCCGCCTTT GGCCATCAAA AGAACACCGT TGTTATTCTT GGCATGGACG GGAGCTTCTA CAGATGCCAG TTTGATCCGG TGAACGGCGG AGAAATGTCT CAGCTTGAGT ACCACAACTG TTTGAAACCG CCTTCAGTTT TCTAAAAGCT ACGTACTTAT TCTCTTTTGT TCCTTATCTC TCTCTCTCTA TCTCTCTGCT ACTTAAGCGG TGAGATTTGT GTATATAATA ATGGGTCGTT CTATAATTTG T |
| Length | 1521 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 21965402.. 21967283 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G62770.1 |
| Description | Transducin/WD40 repeat-like superfamily protein |
| TAIR curator summary | Required for autophagosome formation during nutrient deprivation and senescence. |
| Alias | [AtATG18a][ATG18a][autophagy 18a] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.59166 |
Ahg491509 | Protein kinase superfamily protein |
| 18.4662 |
Ahg328945 | proton pump interactor 1 |
| 20.7846 |
Ahg494224 | RGPR-related |
| 26.1916 |
Ahg934965 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 28.4956 |
Ahg480333 | dynamin related protein |
| 35.0999 |
Ahg927966 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 39.064 |
Ahg950041 | O-methyltransferase 1 |
| 40.398 |
Ahg475195 | secretory carrier 3 |
| 40.4969 |
Ahg489570 | long-chain acyl-CoA synthetase 7 |
| 43.2435 |
Ahg483376 | citrate synthase 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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