Detail



ID : Ahg486783

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486783|fgenesh2_kg.5__2775__AT3G62800.2
Sequence
CGAATGCATT GTCTGATTGT TCACTCGAGT GTGTCTTCAC CATTACAAAG AGATAAAGAT GGATCATGTA TACAAGGGTC AATTGCAAGC ATATGCCCTG AAACATAATC TGGAGCTACC GGTGTATGCC AATGAGCGAG AAGGGCCTCC TCATGCTCCT CGATTTAGAT GTAAGGTTAC ATTCTGTGGA CAGACTTTCC AGAGCCTGGA ATTCTTTCCG ACACTTAAAT CGGCTGAACA TGCCGCTGCG AAAATTGCAT TGGCTTCATT GACGCCACAG AGTCCAGAGG CTAAAATTGC TCAGAAAGAG AATTCTATGT TACCAGTTTA TGCAACTGCT ACTTCTGGTC CATCGCATTC GCCTACTTTT ATTTCGACTG TTGAGTTTGC TGGGAAGGTT TTCACCGGAG AAGAGGCAAA AACCAAAAAG TTGGCTGAAA TGAGTGCTGC TAAAATTGCA TTCATGAGTA TAAAAAATGG GAACTCGAAC CAAACCTCAT CGCCTTCTTT GTCTTGTGAG AGACAAGAAG CTGTAAGTTC AAATGTGAAG AGCAGTCTAC AAGAGATCCA TTCCCAACCT TCCAAGGTGG TGATGACCCC TGATGCCCCA TCAAAGTTGA TGAAAGTGTC TGAAGATGAA TGTCCAGATC TTCATAGTGC ACCAGCCAGT AATGCTAAGG AAATTAACGT TGCTTTGCAT GTGCCTGAAA ATCCTGCAAA CGATGGTACT CTTAATGCAC CAACTACTGA TGGTATGAAG ATGAACATTG CTGCTTCTTC TTCTCCTATA CCTCAGAATC CTACAAACGT TGTTACTCTT AATGCATCAT CTACCAATGG TATCAAGAGG AACATTGCTG CTTGTTCTTC GCGTATGCCT CAGCATCCCA CAAACGATGG TAGTGAAACA TCATCATGTG TAGATGAGAG TGAGAAGAAG AAGCTCATAA TGGGAACTGG CCACCTGAGT ATACCAACTG GCCAACATGT AGTTTGTCGT CCGTGGAACC CGGAGATAAC TCTTCCTCAA GACGCGGAGA TGCTCTTTAG GGATGATAGA TTTATTGCCT ATCGTCTCGG GAAGCCATAA AGACATCATC CTTGATGCAT AAAGTGTAGA GAATATTAAG CTAAGCTATA TCTCAGCTTC TTGTCTCTGG TTTTCTTAAG CAATAAGCTA TGTGCTGTGT AATGACTAAT TTTAGTTTT 
Length1209
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19780655.. 19782574
Download Sequence
A.thaliana
AGI-codeAT3G62800.1
Descriptiondouble-stranded-RNA-binding protein 4
TAIR curator summaryEncodes a nuclear dsRNA-binding protein that interacts specifically with DCL4. May regulate DCL4 function and thereby affect miRNA biogenesis. DRB4 interacts with the P6 viral protein from Cauliflower mosaic virus and may be a target of viral silencing suppression.
Alias[ATTIF3K1][DRB4][double-stranded-RNA-binding protein 4]
Gene coexpression
MR
MR Locus Description
13.0767 Ahg478675 evolutionarily conserved C-terminal region 5
17.6352 Ahg931417 Ribosomal protein L31e family protein
18.3848 Ahg474701 TBP-ASSOCIATED FACTOR 6B
19.4936 Ahg473983 B-cell receptor-associated 31-like
26.533 Ahg915302
29.8998 Ahg481915 transducin family protein / WD-40 repeat family protein
46.7333 Ahg492151 calcineurin B-like 3
50.636 Ahg358053
54.4794 Ahg491117 tonoplast monosaccharide transporter2
57.0964 Ahg480728 pyrophosphorylase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression