| Annotation |
|---|
| Description | jgi|Araly1|486866|fgenesh2_kg.5__2858__AT3G63520.1 |
| Sequence |
TTGCAGCAAA ACAAACAATC ATGGCGGAGA AGCTCAGTGA TGGCAGCAGC ATCGTCTCAG TCAATCCTAA ACCCTCCAAG GGTTTCTCCT CTAAGCTTGT TGATCTTCTG GAGAGACTTG TTGTCAAGCT CATGCACGAT GCTTCTCTCC CTCTCCACTA CCTCTCCGGC AACTTCGCTC CCATCCGTGA AGAAACTCCT CCCGTCAAGG ATCTCCCCGT CCATGGATTT CTTCCCGAAT GCTTGAATGG TGAATTTGTG AGGGTTGGTC CAAATCCTAA GTTTGATGCT GTCGCTGGAT ATCACTGGCA CGTTCTCTTC TTCTTCTTCC ATTTTACAAT ATTCAACTAT TCATCCTGGA TGATACATGG GGTGCGCATC AAAGATGGGA AAGCTACTTA TGTTTCTCGT TATGTTAAGA CATCACGTCT TAAGCAGGAA GAGTTTTTCG GAGCTGCCAA ATTCATGAAG ATTGGGGACC TTAAAGGGTT TTTCGGATTG CTTATGGTCA ATGTGCAACT GCTGAGAACG AAACTCAAAA TATTGGACAA CACTTATGGA AATGGAACTG CTAATACAGC ACTCATATAT CACCATGGAA AACTTCTAGC ATTACAGGAG GCAGATAAGC CGTATGTCAT CAAAGTTTTG GAAGATGGAG ACCTGCAAAC TCTTGGCATG ATAGATTATG ACAAGAGATT GACCCACTCC TTCACTGCTC ACCCTAAAGT TGACCCGGTT ACGGGTGAAA TGTTTACATT CGGCTATTCC CATACGCCAC CTTATCTCAC ATACAGAGTG ATCTCGAAAG ATGGCATTAT GCATGACCCA GTCCCAATTA CTATATCAGA GCCTATCATG ATGCATGATT TTGCTATTAC TGAGACTTAT GCAATCTTCA TGGATCTTCC TATGCACTTC AGGCCAAAGG AAATGCTGAA AGAGAAGAAA ATGATATACT CATTTGATCC CACAAAAAAG GCTCGTTTCG GTGTTCTTCC ACGCTATGCC AAGGATGAAC TCATGATTAG ATGGTTTGAG CTTCCCAACT GCTTTATTTT CCACAACGCC AATGCTTGGG AAGAAGAGGA TGAAGTCGTC CTCATCACTT GTCGTCTTGA GAATCCAGAT CTTGACATGG TCAGTGGGAA AGTGAAAGAA AAACTCGAAA ATTTTGGCAA CGAACTGTAC GAAATGAGGT TCAACATGAA AACGGGCTCA GCTTCTCAAA AAAAACTATC GGCATCTGCG GTTGATTTCC CCAGAATCAA CGAGGGCTAC ACCGGAAAGA AACAGAGATA TGTATATGGA ACAATTCTGG ACAGTATCGC AAAGGTTACC GGAATTATCA AGTTTGATCT GCATGCAGAA GCTGAGACAG GGAAAAGAAT GCTGGAAGTA GGAGGCAATA TCAAAGGAAT ATATGACCTG GGACAAGGCA GATATGGTTC AGAGGCTATT TATGTCCCGC GTGAGGCAGC AGAAGAAGAC GACGGTTACT TGATATTCTT TGTTCATGAT GAAAACACAG GGAAATCATG CGTGCATGTG ATAGACGCAA AAACAATGTC GGCTGAACCT GTGGCTGTGG TGGAGCTGCC GCACAGGGTC CCATATGGCT TCCATGCCTT GTTTGTTACA GAGGAACAAC TCCAGGAACA AACTCTTATA TAAGCCAAGC TGTGTGCATA CACATATAAT ACTTCAGAGT CAGAGATGTG GAACTGGGTG ATACTGATAC TGCCTCGTTT CTCTTTACAT ATAATTACAT TTCATCCTCC AATATCAACA AGGTTTCTAC TTT |
| Length | 1803 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 20056120.. 20059272 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G63520.1 |
| Description | carotenoid cleavage dioxygenase 1 |
| TAIR curator summary | Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds. |
| Alias | [ATCCD1][ATNCED1][CCD1][NCED1][CAROTENOID CLEAVAGE DIOXYGENASE 1][carotenoid cleavage dioxygenase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.58258 |
Ahg480662 | |
| 6.32456 |
Ahg492004 | thylakoid-associated phosphatase 38 |
| 7.74597 |
Ahg902749 | cytochrome P450, family 709, subfamily B, polypeptide 2 |
| 16.1245 |
Ahg479158 | acyl-activating enzyme 7 |
| 16.7332 |
Ahg483703 | calcineurin B subunit-related |
| 18.4391 |
Ahg489859 | Sucrose-phosphate synthase family protein |
| 18.735 |
Ahg486867 | |
| 20.4939 |
Ahg926134 | 3-ketoacyl-CoA synthase 6 |
| 20.4939 |
Ahg495156 | CLPC homologue 1 |
| 20.7846 |
Ahg910333 | alpha-crystallin domain 32.1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|