| Annotation |
|---|
| Description | jgi|Araly1|487225|fgenesh2_kg.6__359__AT5G04430.2 |
| Sequence |
AAGGGAGCCT AGTGGATAGA TAGACGAAGG ACACCAGAGC CACCTTCACA AACCGCTCGG CGACAAAGAC GAAGAAGCCG AGGAAGTAAC GAGCGACGAC GATAGACTTA GTTTTGCTCA GATTCATATC CACCGGCGCC AATTGACGGC GACGACGACG ACGGAAGGAG CAGATTCGAA TTGTGCGAAG ACAGCAATGG AGTCTACTGA GTCATATGCG GCAGGTTCAC CGGAAGAGCT GGCGAAGAGA TCCCCAGAAC CGCACGATTC TTCAGAAGCT GATTCTGCTG AGAAGCCAAC ACACATTCGG TTTCTTGTAT CCAATGCGGC AGCTGGTTCC GTCATTGGGA AAGGTGGCTC GACCATCACT GAATTTCAGG CAAAGTCCGG GGCAAGGATT CAGCTTTCAC GTAATCAAGA GTTTTTCCCG GGGACGACCG ATAGAATTAT TATGATATCG GGCTCAATCA AAGAAGTTGT CAATGGACTG GAACTTATCC TTGATAAATT GCACAGTGAG CTTCATGCTG AAGATGGTAA TGAGGTTGAG CCTAGGAGAA GAATTAGACT TGTGGTTCCT AACAGTTCTT GTGGAGGTAT AATTGGAAAA GGAGGGGCCA CCATCAAGTC ATTCATTGAG GAATCTAAAG CTGGTATTAA GATATCCCCT CTGGATAATA CCTTCTACGG GTTGAGCGAT AGGTTAGTGA CATTATCTGG GACCTTCGAG GAGCAGATGC GGGCAATCGA TTTGATTTTG GCTAAGCTTA CTGAGGACGA TCATTACTCC CAGAATGTGC ATTCCCCATA TTCATATGCA GGTCTTTTCT ACTCTGGTTT TCATGGTCCT CCATATGCGT ATGCGCTTCC TTCTGTTGCA ACAGCGGGAT ACAATTCAGT TAACTACGCG CCCAACGGTT CTGGAGGCAA GTATCAAAAC CACAAGGACG AAGCTAGTAC CACGGTGACA ATTGGTGTTG CGGATGAGCA TATAGGATTG GTCCTTGGAC GTGGAGGAAG AAACATCATG GAAATCACTC AGATAACTGG TGCCCGAATA AAAATATCAG ACCGAGGTGA TTTCATGTCT GGAACCACTG ATAGGAAAGT GAGTATCACA GGGCCACAGA GAGCAATCCA ACAAGCTGAG ACGATGATAA AACAGAAAGT TGATTCAGCC ACAGAGAGAG CCACCGATTA AAACCGTTAA AAGAGAATCC ATCTCAGTTC CTATCTTTGG TCTGTTTACT TCATTTGTTG AGGCTTAAGC TTTCGGATGG GGATCATTAA TCATCTTTGA GTGAGGCAGA GATTTCTCTC TAGGAGCTCT CTTTCGTTTT ATTTATATGT CGACATTATA TAATGTGTTT TTCTCTGGGA GAGAAGCAGA TTTGGAGTTA GAAAAGTACT ATTTTCATTT GTTTTTTAAT AAATTTGTTG CAATTTGTTG AAGTTTTGTT TCCCTTTTGA GTTCTTTCTG TTGTAACAAT TTACAATAAC CAGCCTTTAC ATTGCATTTT GCTTCCTTCT TTTATCAACT ATTTACAGTT |
| Length | 1550 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 1421283.. 1425208 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G04430.2 |
| Description | binding to TOMV RNA 1L (long form) |
| TAIR curator summary | Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication. |
| Alias | [BTR1][BTR1L][BTR1S][BINDING TO TOMV RNA 1][binding to TOMV RNA 1L (long form)][BINDING TO TOMV RNA 1S (SHORT FORM)] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.83095 |
Ahg948687 | tubulin beta chain 4 |
| 13.3417 |
Ahg486792 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein |
| 25.2982 |
Ahg479143 | Ribosomal protein L19e family protein |
| 28.3549 |
Ahg940058 | |
| 33.541 |
Ahg496177 | GTP binding Elongation factor Tu family protein |
| 40.6202 |
Ahg485617 | Eukaryotic aspartyl protease family protein |
| 43.1277 |
Ahg487529 | Ribosomal protein S4 (RPS4A) family protein |
| 43.8178 |
Ahg473757 | ribosomal protein 1 |
| 44.2945 |
Ahg488708 | Ribosomal protein S5 domain 2-like superfamily protein |
| 45.5412 |
Ahg473708 | isopropylmalate dehydrogenase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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