Detail



ID : Ahg485617

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485617|fgenesh2_kg.5__1609__AT3G52500.1
Sequence
CCACAAATTC GATACCATTG GCATTTTCTA TAAATACAAA TATGTATTGG CTGGCTCTCT ATCATCATTT CCACGTATAA AATTTAAAAC ATTTTTATAA TCCCATTTAA TAATGAAGAA GAAAGTCACA GAGATCGAAC ATGATTCTCC ACTTTCCACT TCTTTGTCTT CTTTCTTCTC CTTCTCACTT ACTTAAGCCA TAAGCCATCA AACCCAAAAA CACCACAACT ATGGCTTCTT CTTTCTTCTT CTTCTTCCTT ATCTTCCTCT CCGTCGTCTC CGCCGTCAAA TTACCTCTTT CTCCCTTCTC CCACTCCGAC CAATCACCTA AAGATCCTTA CCTCTCTCTC CGTCGTCTCG CTGAATCCTC AATCGCCAGA GCTCATAAAC TCAAACACGG CACTTCCATC AAACCCGACG AAGAAGCTCT CTCCTCCACA GCCACCACAT CCGCCACCGT CGTGAAATCT CCTCTTTCAC CTAAAAGCTA CGGTGGATAC TCAGTCTCTC TCAGCTTCGG CACACCGTCG CAAACAATCC CATTCGTTTT CGATACCGGA AGCAGTCTCG TCTGGTTCCC ATGTACCTCG AGATATCTCT GCTCCGATTG CAATTTCTCC GGTTTGGATC CGACTCAAAT CCCTAGATTT ATCCCCAAGA ACTCTTCCTC TTCCCGGGTT ATCGGGTGTC AGAATCCGAA ATGTCAGTTT CTATTCGGAG CCAATGTCCA ATGCAGAGGA TGTGACCCGA ATACCCGAAA TTGCACCGTC TCTTGTCCAC CGTACATTCT TCAATACGGA TTAGGATCGA CGGCTGGGAT TTTATTATCC GAAAAGCTTG ATTTCCCGGA TCTAACAGTA CCCGATTTCG TTGTCGGATG TTCAATTATC TCCACCCGAA AACCCGCTGG TATCGCCGGG TTTGGGCGAG GATCCGAATC GCTTCCTTCA CAAATGAAGC TTAAGAAATT TTCTCACTGT TTGGTTTCTC GTCGGTTCGA CGATACCAAC GTCACTACCG ATCTTGATTT AGATACCGGG TCGGGTCATA AATCCGGTTC GAAAACTCCG GGTCTCACCT ACACGCCGTT TCGGAAAAAT CCCAATGTCT CCAACACAGC TTTTCTCCAG TATTATTACC TCAATCTCCG GCGAATCTAC GTCGGAAGCA AGCACGTGAA GATTCCGTAC AAGTTTCTCG CTCCGGGAAC TAACGGAAAC GGAGGATCCA TCGTTGATTC CGGATCTACA TTCACATTCA TGGAGCGACC CGTTTTCGAG CTAGTAGCTG AAGAATTCGC GACACAGATG TCGAATTACA CTCGTGAGAA AGACTTAGAG AAGATCTCCG GAATTGCACC GTGTTTTAAT ATCTCCGGCA AGGGAGATGT GACGGTGCCG GAGCTGATTT TTGAGTTTAA AGGTGGAGCG AAAATGGAAT TGCCGTTATC GAATTACTTC TCGTTCGTTG GGAATGCTGA TACTGTTTGT CTCACGGTGG TTTCCGATAA CACCGTTAAT CCCGGCGGCG GGACTGGTCC GGCGATAATT CTGGGAAGTT TCCAGCAACA GAACTATTTA GTTGAATACG ATTTGGAGAA TGACAGGTTT GGGTTCGCGA AGGAAAAGTG TAGCCCGTGA GTTTTCAGGG GTAAATTTG 
Length1659
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15254691.. 15256529
Download Sequence
A.thaliana
AGI-codeAT3G52500.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.16228 Ahg938360 Eukaryotic aspartyl protease family protein
8.48528 Ahg932181 Lipase/lipooxygenase, PLAT/LH2 family protein
9.94987 Ahg905237 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
12.4097 Ahg482567 NDR1/HIN1-like 12
14.3178 Ahg488871 tubulin alpha-5
14.4222 Ahg927007 SKU5 similar 5
14.4222 Ahg480817 subtilisin-like serine protease 3
14.4914 Ahg930186 cell wall-plasma membrane linker protein
14.6969 Ahg482920 plasma membrane intrinsic protein 2E
15.8114 Ahg480606 EXORDIUM like 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression