| Annotation |
|---|
| Description | jgi|Araly1|487256|fgenesh2_kg.6__390__AT5G04770.1 |
| Sequence |
CCGAACCGAC CCGAATCTTG CCGGTGAGAG AATGGAGGTC CAAAGCAGCA GCAACAATGG CGGTCACTCT TCTTTCTCCA GTCTCCGCGT CTACCTCAAC TCTCTTTCCG CGACGCCTTC TCGTTTATCC CGCCGCGCTA TTTCCGTCTC CACTTCTTCC GACGAGATGA GTCACGTCCG CGCCGTCTCC GGCGAACAGA TGCGCCGTAC TCTCCGATGG TACGATCTCA TTGGACTCGG AATCGGCGGA ATGGTCGGCG CCGGTGTTTT TGTCACCACC GGCCGTGCCA GTCGTCTCGA CGCCGGTCCT TCAATCGTCG TCTCTTACGC CATCGCTGGA CTCTGCGCTC TCCTCTCCGC TTTCTGTTAC ACTGAATTCG CCGTACATCT CCCCGTCGCC GGCGGCGCCT TCAGCTACAT CCGTATCACA TTCGGTGAGT TTCCTGCATT CTTCACCGGA GCGAATCTTA TAATGGACTA CGTAATGTCA AACGCCGCCG TTTCGAGAAG CTTCACCGCT TATTTAGGAA CAGCTTTCGG GATCTCAACA TCCAAGTGGC GATTCGTCGT CTCCGGTCTA CCAAAAGGAT TCAACGAGAT CGATCCAGTC GCCGTTCTCG TAGTCCTCGT AATCACAGTC ATCATCTGTT GCAGTACAAG AGAGAGCTCG AAGGTGAACA TGATAATGAC TGCATTTCAC ATCGCATTCA TATTCTTCGT GATCGTGATG GGGTTCATAA AAGGAGATTC AAAGAATCTT TCCTCACCGG CGAATCCAGA GCATCCGTCG GGGTTTTTTC CGTTCGGCGC GGCGGGAGTT TTCAACGGAG CTGCCATGGT TTACTTAAGC TACATAGGAT ACGACGCCGT TTCAACCATG GCGGAGGAAG TAGAAAATCC CGTTAAAGAC ATCCCCGTCG GTGTCTCCGG CTCCGTCGCA ATCGTCACCG TCCTCTACTG TCTCATGGCC GTCTCCATGT CAATGCTTCT CCCATACGAT ATGATAGATC CGGAGGCGCC GTTTTCTGCG GCGTTCAGAG GATCGAACGG CTGGGAATGG GTGACGAAAG TGGTGGGGAT AGGAGCAAGC TTTGGGATAT TAACATCACT TTTGGTGGCA ATGTTAGGTC AGGCTCGCTA CATGTGTGTC ATCGGACGGT CCAGAGTGGT CCCCTTTTGG TTCGCCAAGA TTCATCCCAA AACATCTACG CCAGTCAACG CCTCCACTTT TCTTGGCATT TTCACGGCGG CTCTTGCGCT TTTCACCGAC CTAAACGTCC TCCTAAACCT CGTCTCCATT GGAACACTAT TTGTCTTCTA CATGGTCGCA AACGCTCTCA TCTTCAGACG TTACGTCCCC GTCGGACCCA CCAAGCCATG GCCCACACTC TGCTTCCTCA CACTATTCTC CATAACCTCT CTTGTCTTCA CCCTCATCTG GAAACTTGTG CCGGAAGGCA AGCCTAAAGC TTTCATGCTC GGTGCCAGCG CGGTGGTGGC TATAGCCATC GTGCTGATCT TCCAGTGCGT GGTTCCCCAG GCTAGGAAAC CCGAGTTATG GGGAGTCCCA TTCATGCCGT GGACCCCGTG CGTGTCGATT TTCTTGAACA TTTTTTTGCT TGGTTCGTTG GACGCACCCT CTTACGTCCG TTTTGGCTTC TTCTCCGGTT TGATTGTGCT CGTGTATTTG CTTTATGGCG TTCATGCGAG TTCTGATGCT GAAGCCAATG GGTCTTTTGG TGTGAAAGAT GGACAAGTCA TGAAAGAGCT AACCGAAGTG TGAAAAGTAT TTATTTAGTT TAGTTTTCTA AAACAACTAG CTTATGTAAT TAAACTCTCT AGTTTCTTTT |
| Length | 1850 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 1581772.. 1585209 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G04770.1 |
| Description | cationic amino acid transporter 6 |
| TAIR curator summary | Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane. |
| Alias | [ATCAT6][CAT6][ARABIDOPSIS THALIANA CATIONIC AMINO ACID TRANSPORTER 6][cationic amino acid transporter 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.23607 |
Ahg495722 | expansin A14 |
| 4.12311 |
Ahg487211 | Pectin lyase-like superfamily protein |
| 26.6458 |
Ahg347939 | Tudor/PWWP/MBT superfamily protein |
| 36.6606 |
Ahg929770 | Protein kinase superfamily protein |
| 36.9865 |
Ahg905790 | ATP-dependent protease La (LON) domain protein |
| 38.6652 |
Ahg483390 | Plant basic secretory protein (BSP) family protein |
| 42.9535 |
Ahg914043 | Leucine-rich repeat (LRR) family protein |
| 43.795 |
Ahg922640 | KAR-UP F-box 1 |
| 53.0094 |
Ahg931324 | |
| 55.1181 |
Ahg323821 | Purple acid phosphatases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|