| Annotation |
|---|
| Description | jgi|Araly1|924040|scaffold_105321.1 |
| Sequence |
GAGAGGTTGA AGCTTGGCTC AATGAGGGGA AGGAGCTACA CCCCGTCACC ACCAAGGGGT TATGGGAGGA GGGGTCGAAG CCCAAGCCCT AGAGGCCGAT ATGGAGGTCG TAGCAGGGAC CTCCCAACCA GTCTTTTGGT TCGCAATCTA CGCCATGATT GCAGGCAAGA AGATCTCAGG AAGTCATTTG AGCAGTTTGG CCCGGTCAAG GACATTTACC TACCAAGGGA TTATTATACC GGAGATCCAC GAGGGTTTGG TTTTGTTCAA TTTATGGACC CTGCTGATGC TGCTGACGCA AAACATCACA TGGATGGTTA TCTTCTTCTT GGCCGTGAGT TGACTGTCGT GTTTGCAGAA GAGAACAGGA AGAAACCGAC TGAAATGAGA GCAAGGGAGC GTGGTGGAGG AAGGAGCAGC AGATTTCGGG ATAGAAGGCG TACTCCTCCT CGTTACTACT CTCGCTCTCG TTCTCCTCCC CGCCGACGTG ATAGATCTCG GTCACGGAGC GGTGACTATT ATTCTTCTCC CCCTAGAAGA CATCACCCAA GGTCTATCTC GCCCAGGGAA GAGCGATATG ATGGGAGGAG GTCATACTCG CGCTCACCTG CCTCTAATGG CTCAAGGGGT CGCAGTTTAA CTCCGGCCAG AGGTAATAGC CGCAACTTAA GCCCCAGCCC TAGAAGAAGC ATAAGCCGTA GCCCAAGAAG AAGCAGGAGC CCGAGCCCGA AGAGAAATAT GAGTCTTAGC CCGAGAAGAA GCATAAGCCG TAGCCCTAGA AGAAGCAGGA GCCCGAGGAG AAGCAGAAGC TACACTCCTG AACCCGCCAG AAGCAGGAGC CAGAGCCCGC ATGGGGGGCA TTATGAAGAA GACCGCTCGC CAAGCCAGTG ATTTGCTAGT CTTGTCCAGA T |
| Length | 911 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 27772612.. 27774785 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G55310.3 |
| Description | SC35-like splicing factor 33 |
| TAIR curator summary | Encodes a SR spliceosome protein that is localized to nuclear specks, interacts with SR45 and the U1-70K protein of the U1 snRNP, has sequence similar to human SC35 protein. |
| Alias | [At-SCL33][ATSCL33][SCL33][SR33][SC35-LIKE SPLICING FACTOR 33][SC35-like splicing factor 33] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.9545 |
Ahg942960 | VIRB2-interacting protein 2 |
| 18.0278 |
Ahg487340 | Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein |
| 22.6053 |
Ahg490909 | conserved peptide upstream open reading frame 49 |
| 23.4307 |
Ahg489414 | CHY-type/CTCHY-type/RING-type Zinc finger protein |
| 24.1868 |
Ahg496364 | Arabidopsis thaliana protein of unknown function (DUF794) |
| 27.7128 |
Ahg495916 | chaperone binding;ATPase activators |
| 29.9833 |
Ahg937188 | conserved peptide upstream open reading frame 61 |
| 31.4643 |
Ahg482247 | cellulose synthase-like D1 |
| 33.0454 |
Ahg495797 | Protein phosphatase 2C family protein |
| 37.2827 |
Ahg927863 | cytochrome P450, family 87, subfamily A, polypeptide 9 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
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| Growth Chamber expression |
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