| Annotation |
|---|
| Description | jgi|Araly1|920619|scaffold_101900.1 |
| Sequence |
ATGAATGCGT GTCTGGGGAC ATGCTCGAAC CAAGGGGAGC GGACATACCA ATATTGTTCC TGGTTTTGGT TGTACTTCCT GTGGTAGCTT ACATATTATT AGGAAAATGG AGTGACATTT CTGAAAAAAG AGGAAGGGCT AACTTGCTGG CTCAGATGGC AGCTGAAGAA GCTTTAAGAG CTGAGACCCT GGTTAATGCG AATAGGGATG TAAGATTTGA GAGTGTGGCT ACTGAGAATA GGGCTCAAAG AACCAAGACC AAGACTGTTT CTGCTGTGAG TGCTGCTGTA AGAGCAGAGT TTGACGCTGG TGTGAGTGAG ACTGTAGCCG AGCAGAGATC TGATTCCGTG ACTGCTACAT GCGGGGTCCC AGTTGTGGCC CCTGTCAATA ATAATGAGTT ACATGTATGT GCAAGGTGTT TTGGTCCTGC TAAGACACGT TGCTCGAGAT GCAAATCTGT TAGATACTGC TCTGGGAAGT GCCAAATAAT TCACTGGAGG ATAGCTCATA AAGATGAATG TGTCCCACTG GAGACTTGCT CTTCGTCATC TGAGAGGGTT TCCTTTGAGA AAGATTCTGT GTTGTATGAC CATGGCATGG ATTCTACAAT GTATAGTAAC AATACTACAC AGGCAGCAAA GGGAAAGACT TCAATTAGCT CTGTTGATTT TGCAAGCTTG GGTATCTCTC AGATTGATAT TACGCCACAA ATCAACACGC AAGGGAGGAA AAGCGTAGGA AAACAAAATT CTTCCAAGTC CAACCGAGAA TCATCTAGAA GAGACAGTGC TGTGTTTGAT TGTTCTGAAG AAGTTTCTCG TGGTGAAGCT GCTTGTGCTG GTGGCGATAA CAAGAAGGGT CACACTAAAC ATAAGTCGAG AAGCAACAGT TATGCTGCGG AAACAAATCC TAGAAGGCAT TCTGTTGACA GCTCTTGTGT GCAAATGAAT GGACAACCTC TTGTAAGTGG TATGCAGGAA AGTCACAAAC ACGAAAACAA TTTGGGAGTA AGAAGCTCTT TTGGTTGTCC AAACACACAA TTTCCTGCAA ATGGGACCAG AACTGCTACA CTGCCCAAAA CAGGTGTTAA CAAATCTGGC GAACAGTCAT GCACAGAGAC AAGTAAGAAG GGGCAAGTCG CTGCAGTATC AAAGACTGTT AGGTCTAAGG ATACTGGCAT CGCTGAAGAA AGCAATGGCA TCTCCTCGAC GATGGGAATA ATGAAGATGA TGGGTTTAAG AAATTCTACA AAGCATGATG ATCGACATAA GAACCTGAAA ATGCTTTTTC CATACGAGGA ATTTCTTAAA TTCTTTCAGT GTGAAGTGTT TGACTTATCA CCTAGGGGCC TTGTAAATTG TGGAAACAGT TGCTATGCAA ACGCTGTCTT GCAGTCCTTA ACATGTACAA AACCACTTGT TGCTTATTTG CTTCGACGAT CACATTCAAG ATCATGTTCT GGGAAAGATT GGTGCCTTAT GTGTGAACTT GAGCAACATG TAATGATGCT AAGAGAATCC GGAGGTCCAC TTTCTGCTAG CAGAATTCTC TCACACATGC GAAGTATAAA TTGTCAGATT GGTGATGGGA GTCAAGAAGA TGCTCATGAG TTCTTAAGGC TTTTAGTTGC CTCTATGCAA TCCATATGTT TGGAGAGACT TGGAGGTGAG ACTAAAGTGG ATCCAAGGCT GCAAGAGACA ACCTTAGTTC AACATATGTT TGGTGGACGT CTCCGCTCAA AGGTTAAATG CTTGAGGTGT GATCATGAAT CAGAAAGATA CGAGAATATA ATGGATCTTA CATTAGAGAT ATACGGTTGG GTAGAATCTC TTCAAGATGC CTTGACTCAG TTTACGAGAC CGGAAGATCT CGACGGAGAA AACATGTATC GATGTAGCAG GTGCGCTGGA TATGTTAGAG CGAGGAAAGA ATTGAGCATT CATGAAGCAC CAAACATTCT CACAATTGTT CTTAAGCGAT TCCAGGAAGG AAGATACGGA AAAATAAACA AATGTATAAG TTTTCCTGAA ATGCTGGACA TGATTCCTTT CATGACAAGA ACCGGAGACG TTCCTCCGCT TTATATGCTT TACGCCGTCA TAGTTCACTT GGATACTCTC AACGCATCTT TCTCGGGTCA TTACATTTCC TATGTCAAAG ATTTGAGAGG GAATTGGTAC AGAATCGATG ATTCCGAGAT TCATCGAGTA CCAATGACTC AAGTTATGTC AGAAGGAGCT TATATGTTGT TCTACATGAG ATCGTATCCG CGTCCTCAAA GAGGAGAACA CAACGGAAAA GCTCCGGTTC ATCATTCACA ACCAAGAAAC GAGATGAAGG AACAGAGGAA ACCAGTTAAC CGCTTCAAAC CGAGAGCAGA ACACAAGAAC ACAGAGTCAT CATCAAGCGA ATGGTCTCTC TTCACAAGCT CAGACGAAGC TTCTTTCACC ACAGAATCAA CCAGAGACTC TTTCAGCACC ATTGACTACA CAGATGTTTG CCACGTCGTA GACTCTTCTT CTCCTTTTGC CATCTTCAAC AACTTAGAGC CATCGCCACA TAACACCGTC GCTTGCAGAA TGTTCTCAGG TACCAAACCC GAAACCCGGT ATTTCGTGGA GCAAGAAACA AATCACAACA ACACGGTCGT GCTGGACTCA TCGACATCAC CATATCCAAG TCCATCAACA GCACCGTATC CGTCCCATGA TTATTACGAT CAGAGTATGT ATGTAAATTA CGAGACTAAC CCAGAATTTA ACAATGGTCA GGATCAGGAT AGAACTTACA GTTACTGGTA GTAAGTAGAA GAGACTAGAG A |
| Length | 2821 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 6809546.. 6813643 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G17110.2 |
| Description | ubiquitin-specific protease 15 |
| TAIR curator summary | Encodes a ubiquitin-specific protease, and its activity has been confirmed in an in vitro assay. ubp15 mutants have defects in cell proliferation, and the associated processes of leaf, root, stem, flower, and silique development. UBP15 can be found in the nucleus and cytoplasm in transient assays. Though UBP15 is expressed in many tissues, UBP15 transcript levels are higher in rosette leaves and inflorescences than in other parts of the plant. |
| Alias | [UBP15][ubiquitin-specific protease 15] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.82843 |
Ahg476389 | tRNA synthetase beta subunit family protein |
| 4.47214 |
Ahg946347 | RNA helicase family protein |
| 5.47723 |
Ahg939309 | RING/U-box superfamily protein |
| 6.245 |
Ahg487993 | catalytics |
| 7.48331 |
Ahg488249 | SWIB/MDM2 domain superfamily protein |
| 9.53939 |
Ahg932325 | Rer1 family protein |
| 9.59166 |
Ahg938850 | DNAse I-like superfamily protein |
| 9.64365 |
Ahg943453 | |
| 12.6491 |
Ahg488691 | transcription regulator NOT2/NOT3/NOT5 family protein |
| 15.1658 |
Ahg477251 | Pre-mRNA-processing-splicing factor |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|