Detail



ID : Ahg488075

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488075|fgenesh2_kg.6__1209__AT5G12310.1
Sequence
ATAAATATTA TTTTTATTTT GGGTCGCCGC TTGATTTTCT GGTGGAGAAG TCGTAATCGT TAAATTAGGG TCTTCTCTTC TTCATCTTCT TCTACATCTC CTCGGCCGTT TCCTACGGAG GATTCCGATC GATCCCTTTT CTCTTTATTC TTTTGGTCAC CGAATCGTTC TCATACCCAT TTTGAACTCG CAACTCTTCT TCCTCAGATT GCTAGATTAG GGTTTTCGTC TGCTTACCGG ATAGATTTCG GAGGAACAAC TTTGTATTTA TCTTCATTAC CAAGTCTTTC GTTTTCAGAT TCCCGGGATC CAAATCGCCA TGACTTCCTC GATCCAGATC GTTGATGAGC AGCAAGTGGA TGTTTTGTCT CTTCATCAAG ATCAGGATGA AAAGAAGACT CAACAAGTGT TCAATGAGCT GAGTTTCGGG AACCATGGCG GCTGTTGTGC TATATGCTTG GATACTATAC CTCTTCAAGA AACAGCTATG GTTAAAGGCT GTGAACATGC TTACTGTGTG ACGTGCATAC TCCGTTGGGC AAGTTACAAA GAGAAACCTA CCTGCCCACA ATGTAAGCTT CCATTTGATT TTCTCAATGT CCACCGCGCT CTCGACGGAA GCGTTGAAGA TTTCATGTTC GAGGAGAGTG TATGCCTCCT CCTGAGGGCA TCATGGTTCC AGCCACTGGA AGCAGTGGAG CGGGTTTCAG ACAATGACAA TTTCAATTAT GATTTCGATA TTCCACCTGA GTATGAGGAT GAGGACGACG ATGACCTTGA CGAGTTTTAT ATGCAAGGTT CAAGTCTTCG TTTAGGAAAC CGGAGGTGGG GTGACAATGG ATTCGTCAGG GCAGGCCGCC AAGAAGCAAG GCCGGTTCAA CATAAGAACC GAGGTGGACA GGCTTCTGGC TCTGAACCCA CTTCTTCATC CTCACGTGAG CCAAAAGATA AGACTAGCAG TGCCATAACA GGAAGGCGTG CAAAGAGGGC AATGAAGCGT GAAGCTGCAA ACAAAGCTGC GGAAGCAGTA GCAGCTGCAA AGCACGAGGC CCATTTGGTT AGGTTGGGAA GGAAGTGACT GTGGTTGTAT ATCTGTAATT ACATTCAACC CACCCCAACC CCAAATGGCC AAATCCATTG ACTTCGATAC TTGAGAATCT GTACATCAGT AGAATCTAAT AATGTTAGAA CCACAAAACT TGCTGAATCT TTGTCGTTAA GATGCTTTGC TAGATTTGAT TTATTTAGTC TGCAACTTTC TCGATCATTT GCTTGATGAG TGAGAGATAC TGTGGCTTAT GATGTGAGAA TTGATCATAT GGAATGAAGA TTAAGTGGTT ATGGT 
Length1345
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4805104.. 4807373
Download Sequence
A.thaliana
AGI-codeAT5G12310.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.3875 Ahg928910 aromatic and neutral transporter 1
19.0526 Ahg496886 F-box/RNI-like superfamily protein
21.9773 Ahg475282 vacuolar protein sorting 34
28.7402 Ahg484186 protein kinase 2B
34.641 Ahg920636 receptor like protein 2
37.0135 Ahg911192
41.9524 Ahg312525 methyl-CPG-binding domain 10
48.0833 Ahg897457 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
53.2165 Ahg481400 EIN3-binding F box protein 1
55.1362 Ahg489733 OSBP(oxysterol binding protein)-related protein 1C
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression