Detail



ID : Ahg920636

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920636|scaffold_101917.1
Sequence
TCGCTATCAT AGATAAGGAA ATGAGATCCA AAGCCAAAGG TCTTGTGAGA CCATTAATCA CAAAACCTGT ACAGCCTCTG AGTTCTCACA TGCATCTCTT CCTCCTCTGT CTTCTTTTCC TATCTGCCCT CTTTCTTACA CTTTCAGAAG CTGTCTGTAA CCTACAAGAC CGAGAATCTC TCATGTGGTT TTCCGGCAAT GTTTCTTCTT CTGTTTCTCC TTTGAATTGG AATTTGTCCA TTGATTGTTG TTCCTGGGAG GGAATTATCT GCGATGGTTC ATCAGATAGT CACGTCACTA TGATTTCCTT GCCCTTTAGA GGACTCTCTG GCACTCTTGC TTCGTCTGTT CAGAACATTC ACCGTCTCTC TCATCTCGAT CTTTCTCATA ACCGTCTCTC GGGTCCTCTC CCACCAGGTT TTTTCTCGAC CCTTGATCAG CTCATGGTTC TTAATCTTAG TCACAATAGC TTCAATGGTG AGCTGCCACT TGAACAAGCA TTTGGAGATG GAAGTGACAG ATTCTTCCCA GTCCATACCA TTGATCTGTC AAGCAATCTC CTCCAAGGAG AAATCCTCAG TAATTCTATC GCTATCCAGG GAGCTATCAA TTTAATCAGT TTCAATGTTA GTAACAACAG CTTCACAGGT CCAATCCCTT CATTCATGTG CAGGAGTTCA CCGCAGCTCA GCAAACTGGA TTTCTCTTAT AATGATTTTA GCGGCCATAT CTCCCAAGAA TTAGGCAGAT GTTTGAGGCT AAGTGTTCTA CAAGCAGGCT TCAACAATCT CTCTGGTAAT ATACCAAGTG AAATCTACAA TCTTTCCGAG CTCGAGCAAC TCTTTCTGCC AGCCAATCAG CTTACAGGAA AGATCGATAA TAACATCACC CAGCTCAGGA AACTAACGTC GCTTGAACTT TACTCCAACC ACCTTGAAGG AGAAATACCA ATGGACATAG GTAACCTCTC CAGCCTGCGT AGCCTTCAAC TCCATATCAA TAAAATCAAT GGTACAGTCC CGCATTCTCT TGCAAATTGT ACTAACCTCG TCAAGTTGAA TTTGAGGGTC AATCGGCTGG GAGGAAGCTT AACAGAGCTC GAGTTTTACC AGTTGCAGAG TCTTAGGGTT CTAGATCTCG GAAACAATAG CTTCACCGGT GATCTCCCTG ATAAGATTTT CTCCTGCAAA TCGCTCACGG CGATCAGATT TGCAGGCAAC AAGTTAACCG GACAGATGTC TCCTCAAGTA TTGGAACTTG AGTCCCTGTC GTATATGTCT TTTTCAGACA ATAAACTGAC GAACATTACA GGAGCTCTCA GCATTCTACA GGGATGCAGG AAGTTGTCCA CTCTAATCAT GGCAAAGAAT TTTTACGATG AAACAGTTCC AATCAAAGAA GACTTTCTTG CCCCAGATGG ATTCCCCAAA CTCCGAATAT TTGGCGTAGG TGCATGTAGA TTGAAAGGTG AAATACCAGC TTGGCTGATT AATCTCAAGA AGGTAGAAGC TATGGATCTG TCAATGAACC GATTTGTGGG GTCAATTCCC GGTTGGTTAG GAACTCTTCC AGACCTTTTC TACTTGGATC TTTCAGATAA CCTACTTACA GGAGAGCTGC CAAAGGAAAT CTTTCAACTA AGGTCTCTGA TGTCCCAAAA GACCTACGAC GCAACAGAAG AGAACTATCT AGAGCTGCCT GTTTTTCTCA ATCCCACTAA TGTTACCACC AATCAGCAAT ACAATCAACT GTACAGCCTC CCACCTACGA TTTACATCAG AAGGAATTAC TTGACAGGGA GTATACCAGT CGAGGTTGGC CAGTTAAAGG TTCTTCATAT CCTGGATCTT CATAGTAACA ATTTATCTGG CAGCATCCCA TATGAACTGT CAAACCTCAC CAACATAGAG AGGCTGGACC TGTCCAACAA CTATTTATCC GGTAGAATCC CTTGGTCGTT AACAAGCCTA AGTTTCATGT CTTATTTCAA CGTGGCGAAC AACAGTCTGG AAGGGCCAAT TCCCAGAGGA GGTCAGTTTG ATACATTTCC AAAAGCATAT TTTGAAGGAA ACCCCTTGTT GTGCGGTGGT GTACTGCTGA CTTCCTGCAC ACCTGCTACA ACCACGGGAA ACGATGAGTT AAAGAGAACA TTTCTTGTGG GGATTGCCAT TGGATACTTT ATTAGCTTTA TTTCTATCTT AGTGGTGCGT CCCCGGTGGG TGTAATGTAG TAAATCATAT GTTTTAT 
Length2247
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6869424.. 6871532
Download Sequence
A.thaliana
AGI-codeAT1G17240.1
Descriptionreceptor like protein 2
TAIR curator summaryEncodes a CLAVATA2 (CLV2)-related gene. Complements the clv2 mutant when expressed under the control of the CLV2 promoter.
Alias[AtRLP2][RLP2][receptor like protein 2]
Gene coexpression
MR
MR Locus Description
22.7156 Ahg494463 Root hair defective 3 GTP-binding protein (RHD3)
33.8231 Ahg350042 glucuronidase 2
34.641 Ahg488075 RING/U-box superfamily protein
37.47 Ahg326738 Transcription factor IIIC, subunit 5
38.7685 Ahg950590 smr (Small MutS Related) domain-containing protein
40.9145 Ahg917537 Calcineurin-like metallo-phosphoesterase superfamily protein
42.8369 Ahg487908 Protein phosphatase 2C family protein
43.8406 Ahg922801 Histone H3 K4-specific methyltransferase SET7/9 family protein
49.8799 Ahg951497 SKP1/ASK1-interacting protein 2
52.9906 Ahg907940 ARM repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression