Detail



ID : Ahg488195

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488195|fgenesh2_kg.6__1329__AT5G13740.1
Sequence
ATTTGGATGG ATCGGTGAAA AACAAAACTG CGGGTGGGTG GCTTTAGGTC CGTGAACATG TGAAGAGAGA TTAAAATGAG TGACACTTGG GTGACCACCT TTTTGCCTTT TAGCTCCAAT TTGTACATAT ATACGTGACT CATCGTCTTT TTCAGTCCCA CACGTTCTGC TCCAGCGATT GAGAGAGAAT CTCTGTGTGG TACTCTTTCA TTTCTCCTTT CCGATTTTGT AAAATGGCGG AGGAGTACAA GGAGGCGTTG TTGGAGAAGC AGCAGTATCA CGACGGATGT CCGGGATGCA AGGTGGAGCA GATGAAGCAG CTCCGGCGAG GATACCCTTA CCTCGAGCTT ACCTTCGTTT GGATCATCGT CCTCTCCACT TCTCTGCCAA TTTCCTCACT CTATCCCTTC CTCTACTATA TGATTGAGGA TTTCGGTGTT GCAAAGACGG AGAAAGATAT TGGGTTTTAC GCTGGATTTG TGGGTTGCTC ATTTATGCTT GGAAGAGCAT TGACGTCTGT GTTCTGGGGA ATTGTGGCTG ATCGTTATGG AAGAAAACCC ATTATACTCT TGGGAACTAT CTCAATTGCG ATTTTCAACG CTCTTTTTGG CTTGAGCGTA AACTTTTGGA TGGCAATTGG CACGAGGTTT CTTCTTGGGA GTTTCAACTG TTTGCTTGGA ACCATGAAGG CATATGCATC GGAAATATTT CGTGATGAAT ATCAAGCAAC AGCAATGTCA GCTGTTAGTA CTGCTTGGGG CATTGGACTG GTCATTGGCC CTGCTCTAGG GGGATTTTTA GCTCAGCCGG CAGACAAATA TCCAAATGTG TTCTCCCAAG AATCCATTTT TGGCAGATTC CGGTATGCAT TGCCTTGCTT TACGATATCA GCTTTTGCCT TGGTTGTGAC AGTACTATGC TGCTTCATTC CGGAGACACT GCACAATCAT AAGCTGGGCA GCACATCACA TGATGACTCA TACGAAATAC TTGAAGCTGC ATCTCATGAA TCCTCTGCTA TCGAGAAGGC AGGAAAAAAC GAAAGAAAGG CTTCTCAGTC TCTCTTGAAG AATTGGCCCC TAATGTCATC TATCATTGTG TATTGTGTTC TGTGTCTGCA TGATACTGCA TACTCTGAGA TATTTGCACT ATGGGCTAAC AGTCCAAGGA AGTACGGAGG TCTGAGCTAC TCAACCAATG ATGTCGGTAC AGTTCTTGCT ATATCAGGTC TTGGCCTATT CTCTTTTCAG GTATTTGTTT ATCCGTTCGC TGAGAAACTG CTAGGACCTG TTCTGGTCAC CCGATATGCT GGGGCACTGA TGATACCTAT ACAAATGAGT TATCCATTTA TAGCAAGCTT ATCAGGTCTC AGTCTAAGCT TGATGTTAAA TTGTGCATCA ATCCTCATAA ATGTGCTAAG TGTGTCTGCC ATAACCGGCC TGTTGATCCT TCAAAATAAA GCAGTGGATC AAAGCCAAAG AGGGGCGGCT AATGGAATAG CTATGACTGC GATGTCTCTC TTTAAAACCG TTGGACCAGC TGGTGCTGGC ATCTTATTTT CTTGGAGTGA GAGGCGATTA AACGCTGCAT TTCTACCAGG ATCGCATATG GTGTTCTTCG TCCTGAATGT GATAGTTGTT GTTGGAGTAG CTCTCACATT CAAGCCTTTT CTAGTAACGG GTCGAAGATG AAAATTCATT TGAATTGGTA AGATAGGGAA TGTATGGACA TGTTGATTCA TTTAATTTCA GATTCAAAAG AAACCCGTAA TAAAATTTCA CTAACCTTAG GATTTCAGCT TCTTCTATTT GTTGTCCTTT ACTCCTTTTG TTTTGCTTTG TCTGATTATT CTATACTCAT AATCGTGGAT CCC 
Length1873
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5335123.. 5338709
Download Sequence
A.thaliana
AGI-codeAT5G13740.1
Descriptionzinc induced facilitator 1
TAIR curator summaryEncodes ZIF1 (ZINC-INDUCED FACILITATOR1), a member of the Major Facilitator Superfamily (MFS) of membrane proteins which are found in all organisms and transport a wide range of small, organic molecules. Involved in a mechanism of Zn sequestration, possibly by transport of a Zn ligand or Zn-ligand complex into vacuoles.
Alias[ZIF1][zinc induced facilitator 1]
Gene coexpression
MR
MR Locus Description
23.6854 Ahg486034 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
27.2397 Ahg940287 serine carboxypeptidase-like 35
35.4965 Ahg495838 Fibronectin type III domain-containing protein
50.8331 Ahg488410 reversibly glycosylated polypeptide 2
52.192 Ahg905237 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
53.3573 Ahg899683
55.3986 Ahg893082
58.3267 Ahg484136 low-molecular-weight cysteine-rich 68
58.532 Ahg480962 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
64.846 Ahg491537 aspartate aminotransferase 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression