| Annotation |
|---|
| Description | jgi|Araly1|495838|fgenesh2_kg.8__1654__AT5G57380.1 |
| Sequence |
CTCAGAGCAG AAGTTTCATC CCTTAGAGGG TTTCCTCTTA GAAACATCTA GAAAAAAAAA AAGGAGAGAG AAGAACCACC AGAGAAACAT CTTTTCCTTT GTACAAATTC CCCATTAAAG ATCTCTAAAC TAAACCTAGA AAGAAAGAAA AAAATCAGAG AAAAAAACGA AGAACACGAA GAACGAAAAA AAATGCAAGC TGCTTCGCTC TCAAAGACCT GGCGTTTTGA TGGAAATGTG GGTCCAGAGA ACATGGATTC TTCTCCATTT CAAGATAATG AATGCATTGA GACTTGTAAA CCAAACGATT TGAATGTAAG TGAAAGGAGA GAATTGATCC ACGCATTGTC TACCCAGCCA CAAGAAGCTT CGGAGCTTTT GAATTCATGG AGCAGAAATG AGATCATGAA GATCATATGT GCTGAGATGG GTAAAGAGAG GAAGTACACT GGTCTGAACA AACCAAAACT CATTGAGAAT CTACTCAATC TTGTGTCTCG TCCTCTTGGA GAGACTTCTT ATTCTGACCG TAGAAACTCG AGGAAGAAGC AGAAGAAGAT GATCGGTTAC ATCATTTGCT GTGAGAATTT AGCTTGTAGA GCTGCGCTTG GAAGCGATGA TACTTTTTGC AGAAGGTGTT CTTGCTGCAT TTGTCAAAAG TTTGATGATA ATAAGGATCC GAGTTTATGG CTTACTTGTG AGGCTTGTGG ATCGTCTTGT CATTTGGAAT GTGGTTTGAA GCAAGATAGG TATGGGATTG GGAGTGATGA TCTTGATGGT AGGTTTTATT GCGCATATTG CGGCAAAGAT AATGACTTGC TCGGATGCTG GAGGAAACAA GTGAAGGTGG CGAAAGAGAC GCGGCGTGTG GATGTACTTT GTTACCGTCT TTCTTTAGGA CAAAAGCTGT TGAGAGGTAC AAGGCAGTAT CGGAATCTGT TGGAACTCAT GGATGAGGCG GTGAAGAAGC TCGAAGGTGA TGTGGGTCCG TTGTCGGGGT GGGCAATGAA GATGGCTCGA GGTATCGTCA AAAGACTTTC GTCGGGATCA CAAGTCCAGA AGCTGTGTTC TCAGGCAATG GAAGCTCTGG ACAAAGTGGT CTCACCATCG GAATCTGTTT CAGGACAAGG TGACAAGATG ACCGTGAGAG TAGAAGAGAT TCAAGCAAGA TCAGTCACTG TGAGATTAGA GTCCGAGGAG CCATCTTCTT CTACACAAAA CCAGATCACA GGTTTCAGGT TGTTTTGTCG GAAGTCGAAG GACGAAGAGT GCTCGTCTGA GGTGAACTGT GTTGCGTATC TACCTGAAAC AAGGTCTACC ATCCAAGGAC TTGAACCCGA CACCGAGTTC TGTCTCAGAG TCGTGTCCTT TAACAAGGAA GGTGACTTAG ATGAGTCCGA GCTTCAGTTC TCAACATTGA AAGACAATAT AGATGAAGCT CGGGACCGGC AAAGCCCTTT GACAAACTCA AGCAGTGGTC TTTGTAGTAA TCCATCTTTG CACGAAGATG AATCTAATAA TGTCCATAAG AGCTGCAGCG AAGAAAACGG TGACAAGGAC AACACCGAAC ACTGTAATGC AGGAGAAGTA GAATCCGAGC TTGAAGAGGA GAGGCTTGTA AAGAGGAAAG CTAACAAGAT AGATGGAAGA GACTTGCTTG TAACACCCTG CAAAAGAGAT ATTTCTAAGG GGAAGCAAGG AGGGAATAAA AGATTCAAAT CAAGAACAAT ATCGGTGAAC GAGAAACCTG AGATCAATAA TGCCGCAAAT GGGGTAGGAG ATAAAGACTT GGGTCAAATT GTGAAGACGA TTAGATGTTT AGAGCAAGAA GGACATATAG ACAGGAGTTT TAGGGAAAGG TTCTTGACAT GGTATAGCTT AAGAGCTACT CACCGAGAAG TTAGAGTTGT GAAGATCTTT GTTGAGACCT TTATGGAGGA TCTGTCTTCT TTGGGAGAAC AGCTTGTGGA TACATTCTCA GAATGCATAG TGAGCAAAAG ATCATCAACA AGTGGCGTTG TACCTGCTGG AATCTGCCTC AAGCTTTGGC ATTAAAGCTT TTGAAATCGG TCTATTTATT AACTTTCTTG ATATTCTACA CCATAACGAT ATTTTGAAGT GAAATTATGT AAGTACACAT TTCCAATTTC TTTCTGATGT CTAGTGAAAA CCTCAAAAAT GAATAGGCAT GATTTC |
| Length | 2196 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 17007247.. 17010278 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G57380.1 |
| Description | Fibronectin type III domain-containing protein |
| TAIR curator summary | Encodes a plant homeodomain protein VERNALIZATION INSENSITIVE 3 (VIN3). In planta VIN3 and VRN2, VERNALIZATION 2, are part of a large protein complex that can include the polycomb group (PcG) proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF), and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. |
| Alias | [VIN3][VERNALIZATION INSENSITIVE 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg927111 | alcohol dehydrogenase 1 |
| 2.82843 |
Ahg941255 | |
| 3 |
Ahg485985 | Regulator of chromosome condensation (RCC1) family protein |
| 3.31662 |
Ahg947912 | |
| 3.4641 |
Ahg490053 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| 4.69042 |
Ahg473251 | Chaperone DnaJ-domain superfamily protein |
| 4.89898 |
Ahg919141 | Major facilitator superfamily protein |
| 4.89898 |
Ahg311978 | galactinol synthase 3 |
| 6.32456 |
Ahg949787 | low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A) |
| 6.63325 |
Ahg922379 | Glycosyl hydrolase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|