Detail



ID : Ahg949102

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949102|scaffold_800989.1
Sequence
GTTTCCAAAA TCCAAAACCA AATGTCGACG GTGAGAAAAA TCACTCTAAA AAGCTCCGAT GGCGAAAACT TCGAAATTGA CGAAGCGGTG GCGCTAGAAT CACAAACCAT CAAGCATATG ATTGAAGACG ACTGTGCCGA TAATGGTATC CCTCTCCCTA ATGTCACCAG CAAAATCCTT TCGAAGGTGA TTGAGTACTG TAAGAAACAT GTCGAAGCTG CTGCGAAATC CGAAACCACC GCCGATGCTG CTGCTGCTAC TACCACCGTC GCGTCGGGTT CTAGTGACGA AGATCTTAAG ACTTGGGATT CTGAGTTTAT CAAAGTTGAT CAGGGCACTC TCTTCGATCT TATCCTGGCT GCTAATTACC TGAATATCAA GGGACTGTTG GACTTGACCT GCCAAACAGT GGCCGATATG ATTAAAGGTA AAACCCCAGA AGAAATCCGC AAGACTTTCA ATATCAAGAA CGACTTCACG CCAGAGGAAG AAGAAGAGGT TCGCCGTGAG AATCAGTGGG CATTTGAATG AATAAAAATG AAGACCTGGT T 
Length551
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G42190.1
DescriptionE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
TAIR curator summarySimilar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis.
Alias[ASK2][SKP1B][Arabidopsis SKP-like 2]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg950087 Adenine nucleotide alpha hydrolases-like superfamily protein
1.73205 Ahg906988 ubiquitin-conjugating enzyme 28
2.82843 Ahg476825
3.4641 Ahg485482 VPS35 homolog C
3.60555 Ahg938978 RNA polymerase Rpb8
4.58258 Ahg479023 Single hybrid motif superfamily protein
8.24621 Ahg473397 Protein of unknown function (DUF760)
8.30662 Ahg938862 multiprotein bridging factor 1B
9.79796 Ahg312852
10.0995 Ahg488142
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression