Detail



ID : Ahg488319

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488319|fgenesh2_kg.6__1453__AT5G14740.2
Sequence
TTTAATCAAC AAGAGGCGAA AATACGGACG CATAATCATA AAATGTAGAT TTTTACTATA GTTTAGTTCT CTTCTTTTTT ATTTCGCCAT TACAATCTCT TAATCTGTAC AAAGATGTTG TGCTCTCATA TACAGTTCAA TTTTTTGTAA ACAAGCTCAA CATGTTCTGT GCTCTGTAAA CTTGGTCCCC TTTTGGGCTA CATTTTCTCG AAATGGCTCA TCAGACTCAG AGACGACTCT CTCATCTGCT TCAGAAGCCA CAAAACAGTA TAAATATCCT TCTCTTCGTC CATTATCTCA TCGCCTGTCT CTCCTCTTCC TCTTCTCGTT CCGTTTATCC GCAAACGGAG CTTGTGTTCG TTGCACCTGC TTCAGTCATC ACTTCAATTT TGGTATAGAA GAAGGATGGG AAACGAATCA TATGAAGACG CCATCGAAGC TCTCAAGAAG CTTCTCATTG AGAAGGATGA GCTGAAGGAT GTAGCTGCGG CCAAAGTGAA AAAGATCACC GCGGAGCTTC AGACAGTCTC GTCGTCCGAC AACAAGTCTT TCGATCCCGT CGAACGAATT AAGGAAGGCT TCGTCACCTT CAAGAAGGAG AAATACGAGA CCAATCCTGC TTTGTACGGT GAGCTCGCTA AAGGTCAAAG CCCAAAGTAC ATGGTGTTTG CTTGTTCGGA CTCGCGAGTG TGCCCATCAC ATGTACTAAA CTTCCATCCT GGAGATGCCT TCGTGGTTCG TAATATCGCC AATATGGTTC CTCCTTTTGA CAAGGTCAAA TATGCAGGAG TTGGAGCCGC CATTGAATAT GCTGTCTTGC ACCTTAAGGT GGAAAACATT GTGGTGATAG GGCACAGTGC ATGTGGTGGC ATCAAGGGGC TTATGTCATT TCCTCTTGAC GGAAACAACT CTACTGATTT CATAGAGGAT TGGGTGAAAA TCTGTTTACC AGCAAAGTCA AAAGTTTTGG CAGAAAGTGA AAGTTCAGCA TTTGAGGACC AATGTGGCCG ATGCGAAAGG GAGGCAGTGA ATGTATCACT AGCAAACCTA TTGACATATC CATTTGTGAG AGAAGGAGTC GTGAAAGGAA CACTTGCTTT GAAGGGAGGC TACTATGATT TTGTTAATGG CTCCTTTGAG CTTTGGGAAC TCCAGTTTGG AATTTCACCC GTTCATTCTA TATGAACTAA CACATCACCA TCACCGTCGC CACCACCACC ACCGTGATCA TCACAAGCAT CATGCATCAT CGTCGTCATC ATCATGATCA CCATCATCAT ATATATATAT ATAATGTTTT ACTCTTATTT AATTGCTGTT TGTAATGGAC ATTTACTTGC GATGAGCTTC TTTTCCTTCA TTATCCACTT ATAAAATAAA TAAAAATCAT CTTTATTTTC ACAGATA 
Length1407
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5738593.. 5743872
Download Sequence
A.thaliana
AGI-codeAT5G14740.1
Descriptioncarbonic anhydrase 2
TAIR curator summaryEncodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform.
Alias[BETA CA2][CA18][CA2][BETA CARBONIC ANHYDRASE 2][CARBONIC ANHYDRASE 18][carbonic anhydrase 2]
Gene coexpression
MR
MR Locus Description
3 Ahg945228 Tetratricopeptide repeat (TPR)-like superfamily protein
3.4641 Ahg492157 Aldolase superfamily protein
5.09902 Ahg477371 carbonic anhydrase 1
5.47723 Ahg484431 glyceraldehyde 3-phosphate dehydrogenase A subunit
6.85565 Ahg941682 Chaperone DnaJ-domain superfamily protein
7.54983 Ahg939592
9.53939 Ahg479886 Nucleic acid-binding proteins superfamily
12.6095 Ahg476761 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
13.4164 Ahg471331 Glycine cleavage T-protein family
13.8564 Ahg486548 Transketolase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression