| Annotation |
|---|
| Description | jgi|Araly1|488376|fgenesh2_kg.6__1510__AT5G15280.1 |
| Sequence |
ATGCTTAATC TTCTCTCCAT CAGTAGCTCT TCTCGGCTTC GTTTTCTTAA CAAGGTTTCT TCTCTCTCAT GTCGTTACTC TTTCGCGTTT TCCTCAGTGC CTTCGTCCTC TTCTTCCTTG GGAAATGATT CAGCGATCCC AAGAAATTAT GAATCTTCCT CGTTTAATTT ACTTTCGAGG TCGAATGAAA AGCTTGACCT TACTGGTTCC TCTCTAAAAG ACTTGCTTTT GGATTTGTCC GATGTAATTC CCAATATTAT CCGTAGATTT AGGAGATTTC CTGGCTTGAA ACCCGAAAAT GTGCTTGAAC TGTTACTGGG TTTTGAATCT GAGCTTCAGA GAGGTAGAAT TGGGAGTACA AAGGTTCAAG CTTTATGGGA GATTTTCAGA TGGGCTAGTG GGCAATACCA AGGGTTTAAG CATCTACCTC ATGCTTGTGA AATTATGGCA TCGATGCTTA TCAGGGAAGG AATGGTTAAG GAAGTTGAAT TTTTGCTTAT GGAGATGGAG AGACATGGAG ACACAATGGT TAAGGAGGGG ATTTTCTGTG ATTTGATTGG TAAATATGTT GATGCTTTCG ATTCCAGGAA GGCGGTTATG CTGTTTGATT GGATGACGCG TAAGGGTTTA GTACCTTTAA CTTCGTGTTA TCAGATTCTA ATTGATCATT TGGTTAGAGT TCATAGAACA GAATCAGCTT ATAGAATTTG TTTGGATTGG GTGGAGACAA CGGCTGAATC AAATCACATG AACATAGATA GCATCGGGAA AGTTATCGAG TTGCTTTGCT TGGACCAGAG GGTTCAGGAG GCTAGAGTCC TGGAAAGAAA GCTTGTGGCT TTAGGTTGTA ACCTGAATAG CTCAATATAT AGTAAGATCA CTATAGGATA CAGCGAGAAG CAAGATTTTG ATGATTTGTT GAGTTTCATT GGTGAAGTTA AATATGAACC TGATGTGTTT GTTGGCAATA GGATTGTGCA TTCTCTCTGC AGGAGGTTTG GCTCAGAGAG AGCTTATGTA TATATGGAGG AACTCGAACA CTTGGGTTTT AAACCTGATG AAGTTACATT TGGTATCTTG ATTGGGTGGT GTTGTTATGA AGGAGATATC AAGAGGGCGG TTCTTTATTT ATCCGAGATT ACGTCAAAGG GTTTCAAACC CGATGTGTGT AGTTATGATG CTATCCTAAG TGGGCTTTTT AGAAAAGGAT TGTGGCAACA TACCCATTGT ATTCTGGATG AGATGAAGGA AAATGGAATG CTGCTCAGCT TGTCTACGTG TAAGATTATG GTAACTGGAT ATTGCAAAGC TAGACAGTTT GAAGAAGCGA AGATGATTGT TAATAAGATG TTTGGTTATG GGTTAATCGA AGCATCTAAA GTTGAAGATC CGCTTTCAGA AGCTTTTAGT TTGGTAGGAT TTGATCCGTT AGCTGTTAGA TTGAAAAGGG ACAATGATTC CACATTTTCC AAAGCTGAGT TCTTCGATGA TCTTGGGAAT GGGCTATACT TGCACACTGA TTTGGATGCT TACGAGCAGA GGGTGAATAT GGTACTTGAC AGGTCCGTGC TACCGGAATT CAATTCGCTT ATTGTTAGAG CATGTAAGGA CGGTGACTTA CAAACAGCAT TGCGGCTTCT TGATGAAATG ACTCGATGGG GTCAAAAACT ATCGCGTCGG AGTTTTGCTG TTTTAATGAG GAGTCTCTGT GCATCGCGTG CCCATCTCAG AGTAAGTGTT AGCCTCTTGG AAAAATGGCC AAAGCTGGCT AATCAGTTAG ATGGAGAAAC CCTTAATTTT CTTGTCCAAG AATATTGCAA GAAGGGATTT AGCCGCCATA GCAAACTCAT TTTCCATAGA ATGGTTCAAA TGCATCATCC TATCGATAAC GTAACTTACA CATCTTTGAT ACGTTGTTTC TGTAAGAAAG AAACACTCAA TGATCTTCTG AATGTGTGGG GTGTTGCCCA GAATGATAAC TGGTTACCTG ATTTGAATGA TTGCGGAGAT CTGTGGGAAT GTCTTGTCCG GAAAGGACTG GTGGCGGAAG CGGTTCAACT CTTTGAGCGT ATATTCATAT CTTATCCTCT ATCTCAGTCA GAAGCGTGTA GGATTTTGGT CGAGAAGTTC ACAGTTCTTG GGTTTTTTTG TATCGCTCAT TCTGTTTTTA AAAGGCTTAT AGGAGAGGGT TACATTGTGG AACAAGAGGT TTACAATCAT CTTATCAAAG GTCTCTGCAC GGAGAAGAAG GATTCAGCTG CATTTGCTAT ACTCGATGAA ATGCTAGACA AGAAACACAT TCCAAGCTTG GGAAGTTGTT TGATGTTGAT TCCTCGGCTT TGTAGAGCTA ACAAAGCAGG AATGGCATTT ATTTTAGCAG AGCAATCAGA TTCACCTTAT GTACACTATG CTTTGATAAA AGGACTATGC TTAGCTGGGA AAATGCTCGA TGCAGAAAAT CAGTTACGTA TAATGTTATC AAACGGGCTT TTACCGTATA ACAAAATCTA CAACTTGATG TTTCAAGGTT ATTGTAAAGG TAACAACGGG ATGAAAGTTG AGGAAGTACT AGGACTCATG GTGAGGAAGA ACGTTATATG TTCGGTTAAG AGTTACAGAG AATATGTTCG AAAAATGTGT TTAGAGCCTC AGTTTCTCTC TGCAATTAGT CTGAAGGAGT TTCTGTTATT AGGAGAAAGC AATCCTAGCG GCGTAATCAT CTATAATATG CTAATTTTCT ATATGTTTTG GGCTACGAAT CACTTGGAGG TTAATAAAGT CTTGCTCGAA ATGCAGGGAA GAGGATTGCT GCCTGATGAA ACCACGTTTA ACTTTCTCGT TCACGGATAC TCTTCGTGTG GAGATTATTC GAGTTCTCTG CGATATATCT CGGCTATGAT CTCCAAGGGG ATGAAACCGA ATAATCGAAG CTTAAGAGCG GTTACAAGCT CTCTGTGTGA TAATGGAGAT GTGAAGAATG CTCTTGACTT ATGGCAGGTA ATGGAATCAA AAGGCTGGAT TTTGGGTTCT TCAGTTGCCC AAACCAAAAT CGTCGAATCC CTAATTTCGA AAGGCGAAAT TCCAAAAGCT GAAGACTTTC TGACCCGTGT GACACGCAAT GTCATGAAGG CTCCCAACTA CGATAATATA ATCAAGAAAC TATCTGATCG CGAGAATCTT GACATTGCGG TTCATCTCTT GAACATAATG CTAAAGAACC AAAGCATTCC GGATTCTTCA AGCTATGATT CAGTCATCAG TGGCTTGCTG AGATGCAATC AATTGGATAA AGCTATGGAC TTTCATACAG AAATGGTGGA GTTAGGTCTA AGTCCAAGCA CAAGTACATG GAGTGGTCTT GTTCATAAGT ACTGTGAGGC ATGTCAAGTT GAGGAATCAG AAAGACTTAT CAAATCAATG GCTGGGTTAG GCGAAACACC GAGTCAAGAA ATGTTTAAGA CTGTGATTGA TCGGTTTCGA GTAGAGAACA ATACAGTGAA AGCTTCAGAG ATGATGGAAA TGATGCAAAA GTGTGGCTAT GAAGTTGATT TTGAGACTCA TTGGTCTTTG ATTAGTAACA TGAGCTCTTG TAAAGAGAAG AAGACAACAA CAGTTGGTGA AGGATTCTTG TCTAGGCTTC TCTCCGGGAA TGGATTTGCT TGGAAGCGAT GA |
| Length | 3672 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 5980877.. 5984548 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G15280.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg944247 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein |
| 10.198 |
Ahg497180 | Protein of unknown function (DUF2361) |
| 14.5602 |
Ahg492344 | SUMO-activating enzyme 1A |
| 25.6905 |
Ahg318122 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 31.749 |
Ahg478494 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 32.5883 |
Ahg488862 | Leucine-rich repeat (LRR) family protein |
| 32.6343 |
Ahg319882 | RPM1 interacting protein 13 |
| 37.1214 |
Ahg948334 | LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein |
| 38.3667 |
Ahg356484 | beta-amylase 2 |
| 46.1302 |
Ahg927596 | cell division cycle 48C |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|