| Annotation |
|---|
| Description | jgi|Araly1|927596|scaffold_300053.1 |
| Sequence |
TTAGCTTCTA ATTCAGTACG ATGGTGAGGA GAGGTCGCGG CGGCGGCGGC GGTGGTATGG GCGGAGGAAT CAATCGTAGA TATCTGAGTA AAGTTATGGA TTCATGCGGC AAGGATTTAG CTACGGCGGA GGACATCGTC GATGATCTCC GTTCCAGGTA CGGTGATTTT GCGAGGTTGA CTCGGCAGGT GCTTCTGCTC AATGTCAGGC AAGTCCTTAA TGTCAGAAAC AACAAGCGGG TTAAAGACGA AGATGAAGAT GACAACAATG GCGATGAGGA AGGTTCTGCT GCTCAGAGGA AGAAACAGAG GCGGGTTGAT GAGAAAGAGG AGAAGTTGCA GCGAGCGGAG CAGTCGCATC TGAGGAGGAG AAATATGGAA CGTTCAGTGT CTTCTTCTCC GTCTTCTTCT TCGTCGGAAG ATAGTGGTGA TGTGTCGACT TCTGAGGACG CGATTTATGG CGAGAAGCTG AGTCCGCCGC GGTTTGATTT GATCAATGAC AGTCTACGAG ATAACTACGC CAAGTTGAAC AGCTCCTCGA AGAAACCAAT TGGGTCGCCT GTGGAAAAGA ATGTGGAAGT TGAGACTGTG AGCAACAAAG GTAGGAGCAA GTTGGCTACA ATGGGGGCCA GAAAGGAGGC TAAAGGCTCT CTTTCCCTCA GTGGAACTAC TGGTAATGGT GATTTGGAAG TTGAGGGTAA TAAAGGACCT ACTTTTAAAG ATTTTGGTGG GATTAAGAAA GTGTTGGATG AATTGGAGAT GAATGTTCTA TTCCCCATTC TCAATCCTGA GCCGTTTAAG AAGATTGGAG TGAAGCCACC AAGCGGGATT CTATTCCATG GACCACCTGG CTGTGGAAAG ACCAAGTTGG CTAATGCCAT TGCCAATGAA GTTGGTGTTC CGTTTTTTAA GATTTCAGCC ACAGAGGTGG TTTCTGGTGT TTCTGGTGCT TCTGAAGAGA ATATTAGAGA GCTCTTCTCT AAAGCATATA GGACTGCGCC TTCGATAGTC TTTATCGATG AGATTGACGC GATTGGATCA AAGAGAGAAA ACCAGCAAAG GGAGATGGAG AAGCGGATAG TAACACAATT GTTGACTTGT ATGGATGGAC CCGGTAACAA AGGCGATAAA AATGTTCCTG ATTCTAGTGC TGGATTTGTT CTCGTCATTG GAGCTACAAA TAGGCCGGAT GCTCTTGATC CTGCTTTGAG GAGAAGTGGA CGATTTGAAT GTGAGATTGC TCTAACTGCT CCAGATGAAG ACGCAAGGGC TGAGATACTC TCTGTTGTAG CCCAAAAACT TAGATTAGAA GGACCCTTTG ACAAGAAAAG AATAGCTCGT TTAACACCGG GTTTTGTTGG AGCTGATTTG GAGAGTGTTG CTTACTTGGC TGGCAGGAAA GCCATAAAGA GAATCTTAGA TTCAAGAAAA TCTGAACAGT CTGGGGACGG TGAAGACGAT AAATCTTGGC TGAGGATGCC CTGGCCAGAA GAAGAGTTGG AAAAGCTCTT TGTCAAAATG TCTGATTTCG AGGAAGCAGT GAATCTAGTT CAGGCATCTT TAACAAGAGA AGGATTCTCT ATCGTGCCTG ATGTCAAGTG GGATGATGTT GGTGGACTTG ACCATCTACG ACTTCAATTC AATCGTTATA TAGTGAGGCC TATCAAAAAG CCTGATATTT ATAAGGCTTT CGGGGTAGAC TTAGAGACCG GATTTTTGCT CTATGGACCA CCGGGTTGTG GCAAGACATT GATTGCAAAG GCAGCTGCTA ACGAGGCTGG AGCTAATTTC ATGCACATCA AGGGTGCAGA ACTTCTAAAT AAATACGTTG GAGAAAGTGA GCTTGCTATT CGTACGTTAT TTCAGCGCGC CCGGACATGT GCACCATGTG TAATCTTCTT TGATGAGGTG GATGCTTTGA CAACAAGTCG TGGCAAAGAA GGTGCTTGGG TTGTGGAACG ACTTTTGAAC CAGTTTCTTG TTGAGCTGGA TGGTGGAGAG AGGCGTAATG TATATGTAAT TGGAGCTACA AACAGGCCAG ATGTAGTTGA TCCTGCTTTC TTGAGACCGG GTAGGTTTGG GAATCTTCTT TATGTACCCC TCCCCAACGC GGATGAGCGA GCTTCAATTC TAAAAGCTAT TGCAAGGAAG AAACCGATAG ATCCTAGTGT TGATCTGGTT GGAATCGCAA AGATGAACTG TGAAGGTTTC AGCGGAGCTG ATCTCGCGCA CTTGGTGCAA AAAGCTACAT TCCAAGCAGT GGAGGAAATG ATAGGCTCCA GTGAGTCGTC TGAAGATGAT GTTTCAGATA TAACCCAGTG TACAATCAAG TCAAAACATT TCGAGCAAGC CTTGTCCTTA GTCTCGCCCT CTGTGAACAA ACAGCAAAGA AAACACTATG ACGCACTATC AAAAAAGCTT CAAGAAAGCG TTGGAAAGAA CACTGAAGAA CAAGTCACCA TAGGGCCATC TTTTACCCTC GAGTAAAAAC ACTCCTACTT ATAGAAT |
| Length | 2507 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 157983.. 161294 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G01610.1 |
| Description | cell division cycle 48C |
| TAIR curator summary | AAA-type ATPase - Over 90% homologous to CDC48a |
| Alias | [CDC48C][emb1354][cell division cycle 48C][embryo defective 1354] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.583 |
Ahg948632 | RNA helicase family protein |
| 11.8322 |
Ahg892406 | DEA(D/H)-box RNA helicase family protein |
| 13.1149 |
Ahg483634 | Translation elongation factor EFG/EF2 protein |
| 13.6382 |
Ahg487419 | splicing factor-related |
| 13.784 |
Ahg941854 | prefoldin 5 |
| 16.2788 |
Ahg910284 | |
| 16.5227 |
Ahg488188 | IKI3 family protein |
| 16.7332 |
Ahg475221 | plus-3 domain-containing protein |
| 17.4356 |
Ahg481427 | ATP-dependent protease La (LON) domain protein |
| 19.0788 |
Ahg478051 | NagB/RpiA/CoA transferase-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|