Detail



ID : Ahg944247

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944247|scaffold_700476.1
Sequence
TTCGATTTCA CCGTCGCCGG TAATGGCTCC GAAGTCGAAA AATGCAACAG TCTCTGATGT CGTTTATCTC GACAGTGACA GTGACAGTGA CGATGGAGTA GGAGGAAGAG GAGCTTTTAG AAGCATGGCG TCGCTAATGG AGAATCAGCA AGTTCCAAGT ACAATCGCTG ATGCTGCGAC GGTGGCTCCT CGAGAAACCC TAGAATGCCG GAGTTTCTGG AAAGCCGGCG AAAACTTTGC GATCCCTAAC GGTGTTACCC CAACTGCTTC AGGTATGGTT GAGCATGCTC GAGTACATCC AAAGTTTCTT CACTCGAATG CTACTTCACA CAAATGGGCT TTTGGAGCAA TCGCCGAACT GCTTGACAAT GCTGTTGACG AGATACAAAA TGGCGCTACG TTTGTTAAGA TTGATAAGAT CGATATTGTC AAAGATAATT CTCCAGCTTT AGTTTTCCAA GATGATGGCG GTGGGATGGA TCCTGATGGA CTCAGAAAAT GCATGAGCTT AGGCTACTCA TCAAAGAAGT CTAATACAAC AATTGGACAG TATGGAAATG GTTTCAAGAC AAGTACCATG AGACTTGGAG CTGATGCTAT CGTTTTTAGT CGCTCAAGTC GTGGAGGCAA ATCTACTCAG AGCGTTGGTC TTCTGTCTTA CACGTTCCTC AGAAAAACTA GTCAGGATGA TGTCATTGTT CCTATGATTG ATATTGATAT ATCCAAGGAG CGACCACAAC CAATTATCTA TGGATCTCCA GAAGATTGGG CTGCCAACCT TCAAATTCTA CTCAAATGGT CTCCGTTTTC TACAGAGGAT GAACTTTGGC AGCAGTTCGT GGAAATTGGA ACACATGGAA CAAAAGTAAT TATATACAAC TTGTGGCTTA ATGATGAAGG AATTTATGAG CTGAGTTTTG ACGACGACAG TGAGGACATC CGGCTCCAAG ATGAAGGTGT CCATGATGGG AAACGGTTGC CCCCTAAAGT ATTGGAACTG AGATCTCATA TATCATACCA ATTACGTTAC TCTCTGAGGG CTTACGCTTC AATGTTATAT CTCGAGAAGT TCGAAAATTT CAAAATTATA CTACGAGGAA TCCCTGTGGA GCAGTTCAAC ATTGCTGATG AACTCAGATA TTCCAAGATT ATAAAGTACA AGCCCTATAA AGCTACTATG GAACAAGCTA CCACTAAAAT CAAAGTTGGA TTTATAAAGG AGGGGCCTAA GCTTGCAGTT TGTGGTTACA ATGTTTATCA TAAAAACCGT CTCATCCGGG TAAAGACCTG TAGGAGAGAC TCATTAATCA AAATCTGTTC CCCAGGAGTT CTTGAAGCAA ACTTCATAGA ACCAGCCCAC GATAAGCAAG ATTTTGAGAG GTCGTCTCTA TTTCAGCGGC TGGAGGCGAG GTTGAAAAAG ATTGTCCATG ATTACTGGCA GAGCCATGTC CAAGTTTTTG GATACAATAT TTATAAAGTG CCTGCACCTG CTGTTAAGTC GAAAAAGATA GCAATACGTG ATCAACCACC TACTGTTAAT ACATTCAATC ATTTACCTTT GCCTTCTGAT AGAATCAGTC AAGGTGGTCC GATAATACGT GAAATCAGTC TTAGTAATGC CACTTCAAGC CGTACAGTTG CTGTTGCAGC GCCACATTTG AGAAATTCCA CGGGTCTAAG AAGTAACTTC CAACCAGTGC AGCTCAGCCC TCAACCTGCA GCTACCGTAA GTGAAATATC TTCCCAGCTG GATACTGAAA ACAACCTTGT TGGCATGTCA GCGGATGAGA TAAGCGAAGA GAACATGCAA CTCTTCATGA GGTGCGAGGA ATATGTAAAG AAAGAAACAG AAATGGAACA GGCGGTAAGT AACTTAGAAA AGGAACTGGA AGAAACTAAA AGTAAATGTG CACGACTTGC ACTGCTCGTG GATGCTAAGA GGAGGGAGAT GCAACAGGAA GACAGTTAGG ATCTAACGCA AGTCTCTGG 
Length1989
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1782024.. 1785877
Download Sequence
A.thaliana
AGI-codeAT4G36280.1
DescriptionHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
TAIR curator summary
Alias[CRH1][CRT1 Homologue 1]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg496533 nuclear factor Y, subunit C4
3.4641 Ahg488376 Pentatricopeptide repeat (PPR) superfamily protein
9.48683 Ahg495104 Pentatricopeptide repeat (PPR-like) superfamily protein
16.9706 Ahg917507 Arabidopsis thaliana protein of unknown function (DUF794)
24.6577 Ahg489200 Plant protein of unknown function (DUF639)
25.2587 Ahg336125 Tetratricopeptide repeat (TPR)-like superfamily protein
26.0768 Ahg355153 arabinose kinase
27.0555 Ahg313917
27.3679 Ahg475937 B-box zinc finger family protein
30.249 Ahg941391 CHY-type/CTCHY-type/RING-type Zinc finger protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression