Detail



ID : Ahg488472

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488472|fgenesh2_kg.6__1606__AT5G16220.1
Sequence
AAAATTGCAC CACCATGACC ACCGTCTCCT CCGCTTCCGC CGCCGTAACG GAAGGCGCGA AGATTGTCAC ACCGAGCTTG AAGAAGAATG AAAGAAATGG AACGATACGG GTGATGTGTA GGTATGGCGG TAGTATTCTC TCACTTCCGC AGACGAAATC GCCGCGTTAT GTAGGCGGAG ATACTCGAAT CGTCGCCGTT CCTCCCTCCG CGGAAACGAG CTTCGATTCT CTTGTTAGCC ACCTTACGGT TACGCTCGGA ATCTCTTATC CTTTCAAGGT TAAGTATCAG CTTCCTGATC AGGAACTGGA TTCGCTTATC TCCGTCGAGA CAGATGAGGA TGTTCAGATC ATGATGGAAG AACACGGATA TCTCCCCTCC GAGTCCTCGA TTCCCCAATC GCGTATCCGA TTGTTTCTTT TCCCATTGAA ATCAGAAGCT GGTGCGAGTC AGGGAGATTC AGATCAGTGT AAAGTGGAGA CTGATATCGA TTGGCTTGGA ATCGAAGAGT CTAAGCCTAT TAGCGACGAG TTGACACAGC CGGTGCTTCA GCACCCTAAG ACGGAGATGT GGTTCGTAGA CGCGTTGAAG AGCGCGGAGA TGTTGCAGAG TGGGCGAAAT AATAGCGGAA GTAGCGGAAG TGGAGATGGC AACGGCGGGA TTTGCGGACA GGAGTCGATG ATGCTCGAGA CCAATTCCTC CTTTGGCTCG ACATCATCCT CGGTTTCTTC GAGCAATTTA CCTCCGATGA AAAGCACCGG CGAGGACAAC ACAGCGAATT CGCAGGTCAA ATTTGCGCCA ATAGAATCAG TGACAAGAAA CAACAATACT GCAGTCACCC CAATCTCTTC TCACGAGCTA CCATCACACT CACATGCTTT TGAGAACAAA CCGTCTTCAA ACTTGTATGA GGCTGAGCTA AACAGACCAG TTCCAATCCC AATTTCCGGG TATCCACCAT TTATGAACCA AGCTCAACAA CAACATATCC AAGTCATTTA CACTGGACAA CCTTACATTA CCGGAAACTC ACCTATGACA TTGCCTGCCA CAGCATACCA TCACACAAAC CACATCCATT ATCAGCTTCC GCCACAACCA TACCCAATCT ATTACATTCC AGTCGAGCAA TACAGTTCGA GGCACGTTCA ACCACCGCCT GTGAAACCGG GCACCGTTTT AAACTCTCAC CAAGTTGATT CTCAGGTGGT CCGCACCAGC AGCCCTCTAG CACCAGAGTT TTCCTCGCAG GTTTATCCTC CATCCAATCC CGTTGATTCA TCGGTACAAA CATCAAGTGA AGCTACTCTT AGTACTACTT GCAGAGATGT TTTCATCTAT AACACCGACG ACGATGACAA CAACGATATG GCTCGTGCTC AGATTTACAA ATCTCAGCCT CCAGCTCCCA CATTACCGTC TCAGTATTAA ACCATTATGC TGTCCGAAGC TTTCAGTCAG TTACACGCAC ACACGCACAC AATGCTTGAG AGATCTTAGA ACCCTTTCTC GTGTTACTGC ACTTTCAGGT ATTTGGTTTT ACAGTTTTGT TTTGGT 
Length1556
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6324953.. 6327096
Download Sequence
A.thaliana
AGI-codeAT5G16220.1
DescriptionOcticosapeptide/Phox/Bem1p family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.4018 Ahg479760
12 Ahg913127
24.3721 Ahg927187 auxin response factor 17
24.8193 Ahg487067 ubiquitin-protein ligase 4
26.0384 Ahg480836 H(+)-ATPase 1
31.9374 Ahg494930 RING/U-box superfamily protein
36.2767 Ahg351743 Tetratricopeptide repeat (TPR)-like superfamily protein
40.2989 Ahg935879 ENTH/ANTH/VHS superfamily protein
43.2666 Ahg317082 WRKY DNA-binding protein 58
43.589 Ahg924612 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression