Detail



ID : Ahg927187

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927187|scaffold_202748.1
Sequence
GTTTACAGTG ATAACAGATA CCTATGTCAC CGCCGTCGGC AACCGCCGGT GACATCAACC ACCGTCAAGT CGACCCAAGG ATCTGGCGCG CTTGTGCTGG TGCCTCCGTT CAGATCCCTC TCCTCTACTC TAGGGTTTAC TACTTCCCTC AAGGTCATGT GGAGCACTGT TGCCCTCTCA TCTCTACTCT TCCTTCGTCT ACCTCTCCGG TTCCATGTCT CATCACTTCC ATCCAGTTGC TCGCCGATCC GATCACTGAC GAGGTTTTTG CTCACCTTGT TCTTCAACCG GTGACGCAGG AGCAGTTTAC TCCGACTAAT TATTCAAGAT TCGGTAGATA CGATGGCGAT GTTGATGATA ACAACAAGGT GACTACCTTC GCCAAGATTC TCACGCCTTC TGATGCTAAC AATGGAGGTG GATTTTCGGT TCCTCGTTTC TGTGCTGATT CCGTCTTTCC TCCGCTTGAT TTTCAAATCG ATCCACCGGT TCAGAAGCTC TACATCACCG ATATCCATGG AGCTGTTTGG GATTTCAGGC ATATCTATCG CGGTACACCG AGGCGTCACT TGTTAACCAC CGGATGGAGC AAGTTCGTGA ATAGCAAGAA GCTAATCGCT GGCGATTCGG TGGTGTTTAT GAGGAAAGCT GCAGATGAGA TGTTTATGGG TGTTAGGCGA ACACCGATCT CAAGCAGCGG CGGAGGAAGC AGCTATTACG GCGGGGATGA GTACAACGGC TATTACAGCC AGAGTAGCGT TGCTAAGGAA GATGACGGGA GTGCGAAGAA GACGTTTAGG AGGTCTGGGA AAGGGAAATT GACCGCTGAG GCTGTGACGG AGGCGATCAA TAGAGCAGCT AAGGGATTGC CATTTGAGGT GGTGTATTAT CCGACTGCTG GATGGTCAGA ATTTGTGGTG AGAGCTGAAG ATGTTGAGTC CTCCATGTCT ATGTTTTGGA CTCCTGGGAC TCGAGTCAAG ATGGCTATGG AGACTGAGGA TTCCTCTCGG ATCACTTGGT TTCAGGGCAT TGTTTCCTCT ACTTATCAAG AAACTGGTCC ATGGCGTGGA TCTCCATGGA AACAGCTTCA GATCACATGG GATGAACCTG AGATTCTGCA AAACGTGAAG AGGGTGAATC CTTGGCAAGT GGAAATTGTT GCAAATGCAA CCCAACTTCA TGCTACTTTC CCTCCAGCAA AGAGATTGAA GTATCCACAA CCCGGAGGGT TCTTGAGTGG AGATGACGGA GATATCCCCT ATTCTCAAAG AGGACTGTCT AGTGCAGCAG CACCTGATCC AAGTCCTTAT ATGTTCCCGT ATTCTACATT TCCTGCTGGC ATGCAGGGAG CCAGGCAATA TGATTTTGGG TCTTTCAATC CAACCGGATT CATTGGAGAG AATCCTCCCC AGTCATGCAC CAATAACTTC TTCAGTCCGC TTCCAACCGG GTTGGGAAAA GTGTCGACTG AGATGAATTT TGGCAGTCCA CCATCAGATA ACTTATCGCC TAATAGCAAC ACCACTAATC TGTCCTCTGG AAACGACCTG GTTGGAAACC GAGCCCCCAT TTCAGCAAAA GCTAACTCGA TTCGGTTATT TGGCAAGACC ATTACCGTGC AGGAGCGTTC TGAGAGCGGT CTTGCAGAGT CTGGCTTGTG TGAAGAGGAT GGCAGCAAAG AGTCCAGCGA CAATGAGACA CAATTGTCCT TGACACATGG TCGTGGTCCT CCAAGCGTGT GAAGATTCTG TAGGTGCCTA AA 
Length1762
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16838944.. 16841164
Download Sequence
A.thaliana
AGI-codeAT1G77850.1
Descriptionauxin response factor 17
TAIR curator summaryPosttranscriptionally regulated by miR160 and is essential for proper development.Regulates early auxin response genes.
Alias[ARF17][auxin response factor 17]
Gene coexpression
MR
MR Locus Description
12.49 Ahg486329 citrate synthase 2
12.6491 Ahg493953 HD domain-containing metal-dependent phosphohydrolase family protein
12.7279 Ahg473134 transcriptional regulator family protein
20.3961 Ahg483334 vascular plant one zinc finger protein 2
20.7846 Ahg474290 Amino acid dehydrogenase family protein
21.2603 Ahg927133 transcription coactivators
22.2486 Ahg945696 Protein kinase superfamily protein
22.6495 Ahg485198 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2
23.0651 Ahg495433 Ypt/Rab-GAP domain of gyp1p superfamily protein
23.9792 Ahg947599 glutathione S-transferase THETA 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression