Detail



ID : Ahg488603

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488603|fgenesh2_kg.6__1737__AT5G17380.1
Sequence
AATGGCGGAT AATTCAGCAA CCACTCCACC GTCAATTGAT GGCAACGTTC TCGTGGCCAA GTCACTATCT CATCTCGGCG TCACCCACAT GTTCGGCGTC GTGGGAATCC CCGTCACGTC TCTAGCTAGC CGAGCCATGG CTCTAGGCAT ACGTTTCATC GCCTTCCACA ACGAACAATC CGCCGGATAC GCCGCTTCTG CTTACGGTTA CCTCACGGGT AAACCCGGTA TCCTTCTTAC GGTTTCGGGT CCGGGTTGCG TTCACGGGCT CGCGGGTCTT TCCAACGCTT GGGCTAATAC ATGGCCGATG GTGATGATCT CTGGTTCTTG TGATCAGAGA GATGTTGGTC GTGGAGATTT CCAGGAGCTT GATCAGATCG AAGCTGTGAA AGCTTTTTCG AAATTATCGG AGAAAGCGAA AGATGTTCGT GAAATCCCTA ATTGTGTTTC TAGGGTTTTG GATCGAGCTG TTGCGGGTCG ACCCGGTGGG TGTTATCTGG ATATTCCGAC TGATGTGTTA CGTCAGAAGA TTTCTGAATC TGAAGCGGAT AAATTGGTGG ATGAGATTGT GAAATCTCTA AAGCAAGAAC CGATTCGGGA GTCTCTGAGA TCGGAGATTG AATCGGCGGT TTCGTTGCTG AGGAAAGCTG AGAGGCCATT GATTGTGTTT GGTAAAGGAG CTGCGTATTC GAGAGCAGAG GATGAGCTGA AGAAGCTTGT TGAAATTACT GGAATACCCT TCTTACCAAC TCCGATGGGT AAAGGTTTGT TACCGGACAC ACACGAGCTC TCGGCGACTG CGGCGAGGTC TCTTGCTATT GGGAAATGTG ATGTTGCGTT GGTGGTTGGA GCTAGGCTTA ACTGGCTTCT TCATTTCGGA GAGTCGCCTA AATGGGATAA AGATGTGAAA TTTATATTGG TGGATGTCTC TGAGGAAGAG ATTGAGCTTA GGAAACCTCA TTTGGGGATT GTTGGAGATG CTAAAACAGT GATTGGATTG TTGAACAAGG AGATCAAAGA TGATCCTTTT TGTTTGGGGA AGTCTAATCC ATGGGTGGAA TCGATTTCGA AGAAGGCGAA AGAGAACGGT GAGAAGATGG AGGCACAGCT TGCTAAAGAT GTGGTTCCTT TCAATTTCTT GACTCCTATG AGGATAATCA GAGACGCGAT TTTGGCGGTG GAAGGACCGA GTCCTGTTGT GGTATCGGAA GGTGCTAATA CAATGGATGT AGGAAGATCG GTTTTGGTTC AGAAAGAGCC AAGGACAAGG ATTGATGCAG GAACTTGGGG AACAATGGGT GTTGGTTTAG GTTATTGTAT TGCTGCTGCT GTTGCTTCTC CTGATCGGCT TGTTGTCGCC GTTGAAGGAG ACTCTGGTTT CGGATTCAGC GCCATGGAAG TTGAGACGTT GGTTCGATAC AATCTACCTG TGGTGATTAT AGTCTTCAAC AATGGTGGTG TATATGGTGG TGATCGAAGG GGTCCTGAAG AAATCTCCGG TCCTCATAAA GAAGATCCAG CACCAACATC TTTTGTTCCT AATGCAGGCT ACCACAAGCT TATTGAAGCC TTTGGAGGCA AAGGTTATAT TGTGGAAACA CCTGATGAGC TTAAATCCAG TCTCGCTGAG TCGTTCGCCG CAAGAAAACC CGCAGTGGTT AACGTCGTCA TCGATCCTTT CGCTGGTGCT GAGAGTGGGA GATTACAGCA CAAGAACTAA AAGCTTTGTG GAGAGTTTTA ATAATAATGT TGAAGTTGTT TGTTGTGAAC AAAAAAAAAA AGAAGCGTTT TAGTTTTCAG TTTTTCACTA TTGTAAACCG GATCATAAAA ATACACGTTT CCGGTTCAAT TCT 
Length1853
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6849529.. 6851497
Download Sequence
A.thaliana
AGI-codeAT5G17380.1
DescriptionThiamine pyrophosphate dependent pyruvate decarboxylase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg487152 Protein kinase superfamily protein
12.9615 Ahg487575 glutamate dehydrogenase 2
13.0384 Ahg485812 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
23.8747 Ahg490619 FAD/NAD(P)-binding oxidoreductase family protein
24.5764 Ahg473134 transcriptional regulator family protein
24.8596 Ahg488533 Inositol 1,3,4-trisphosphate 5/6-kinase family protein
27.9285 Ahg480601 ubiquitin family protein
27.9285 Ahg471920 glutathione S-transferase TAU 24
28.3196 Ahg944135 Myosin heavy chain-related protein
29.7489 Ahg491808 Metallopeptidase M24 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression