Detail



ID : Ahg488725

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488725|fgenesh2_kg.6__1859__AT5G18460.1
Sequence
GAATCTTGAT TTGATCTTCT TCTCGAAAAC CTCATTGCTT CTGCTTCTTC TCTTCGATTT CCATATTTAC ACTTCATAAT ATCTCTTCAC CCACTTCTCT TCTTCCCCAT TTATAACTCA CAAATATATA CATTTATATA TTTTGGGCTA GCTATAGTAA TTCTCTAATA TCTCTTTCCA TTTTCTTGAA ATGGTCCTCC TCTCACCTTA ACTTTAATAA GAATCTGACC TCCTCTCAGT TTCCAATTTC TTCACTTTCT CGTTCTTTGG ACACTGAATG TGATACATAT ATACAAGAAG AAAGCTTTAA AAGATCGATC GATGGAGGTT GTTGTTCTTG CATCCAAGAG AAGTCTTCTT CTTTTTCTTC TTATTGTAAG TCTCTCTTTG AGCCAGAAGG TCATACATAT CTCTGCCTTT AACGACAGCA AACCATACAG ACAAGTCAGT AGCTTGAGAC TTGCGAGGAT CCAAAAGCAC TTGAACAAGA TCAACAAGTC TCCTGTCTTC ACCATTCAGA GTCCAGATGG TGATGTAATA GATTGTGTAC CCAAAAGAAA GCAGCCAGCT TTGGATCATC CACTCTTAAA GCATCACAAG ATTCAGAAAG CACCGAAGAA AATGCCGAAG ATGAAGGGAA AAGATGATGA TGTTAAAGAA GCAGAGAATG TATTGGAAGG TGCATGGCAA ATGTGGCACG TGAACGGCAC GTGGTGTCCT AAGGGGACGG TTCCCATACG ACGCAACACA ATGAACGATG TGCTCAGAGC CAAGTCTTTG TTTGACTTTG GCAAAAAGAG ACGGAGTATT GACCTTGATC GACAGACAGA GAAGCCTGAT GCACTTGGTA CCAATGGACA TGAGCATGCG ATCGCGTATA CGGAAACATC GTCGGAGATA TATGGAGCAA AGGCGACGAT AAACGTTTGG GATCCAAAGA TAGAAGAAGT GAATGAGTTT AGTCTCTCTC AGATTTGGAT TCTCTCTGGA TCTTTCGTCG GTCCTGATCT CAATAGTATA GAAGCTGGCT GGCAGGTCAG TCCGGAGCTG TATGGTGACA ACAGACCAAG ATTGTTCACT TATTGGACGA GTGATTCATA TCAAGCAACA GGATGTTACA ATCTTCTATG TTCTGGATTT ATCCAAACAA ATAACAAGAT TGCCATTGGA GCAGCCATTT CTCCTCTTTC TACTTTCAAA GGAAACCAAT TTGATATCAC AATACTCATT TGGAAGGATC CGAAAATGGG GAATTGGTGG ATGGGTTTAG GGGACAGTAC ACTAGTGGGG TATTGGCCAG CCGAGCTATT CACACACTTG GCCGACCACG CGACTACCGT GGAATGGGGC GGTGAGGTTG TGAACACACG AGCTTCAGGC CGGCACACGA CAACCCAAAT GGGTTCTGGT CATTTTCCAG ACGAAGGATT TGGAAAAGCA AGTTACTTTC GGAATTTGGA AGTTGTGGAT TCGGACAACA GTCTCGTACC GGTGCGTGAT GTCAAGATAT TAGCCGAGAA CACCGAATGT TACGACATTA AGAGTTCGCA TAATAATGAA TGGGGAACTT ATTTTTACTA TGGTGGGCCG GGGTTTAATC CTAGGTGTAA TTGAAATTGG GTTGGAGGAG TGGAGAAAAA AAAAAAGGGG TCGAATATGT AATTTTTTCA ATTACGGGTA GTGAAAATTG AATATTGGCT TATTGTTTTT GATTTGTCGT TGTTGGTTTA AATCTAGTAA TTTATTGCAC TCATAGAAAA AAGAAGTGTG TATGCAATAA TGAAAGTATG AGATAAATTT T 
Length1801
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7327261.. 7331429
Download Sequence
A.thaliana
AGI-codeAT5G18460.1
DescriptionProtein of Unknown Function (DUF239)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.0788 Ahg495659 FASCICLIN-like arabinogalactan 1
21.7715 Ahg920798 plasmodesmata callose-binding protein 3
21.8632 Ahg928939 Leucine-rich repeat (LRR) family protein
26.4197 Ahg914136 Pentatricopeptide repeat (PPR) superfamily protein
27.4226 Ahg477915 Heavy metal transport/detoxification superfamily protein
30 Ahg487235 3-ketoacyl-CoA synthase 19
34.8999 Ahg494545 FAD-binding Berberine family protein
39.2301 Ahg487992 ARM repeat superfamily protein
41.1825 Ahg494887 Actin-binding FH2 (formin homology 2) family protein
41.7133 Ahg496399 ERECTA-like 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression