Detail



ID : Ahg494545

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494545|fgenesh2_kg.8__361__AT5G44410.1
Sequence
CAACATAAGA AACAGACACA ACATAAAAAA CAATCTTGCC ACTTGATATA AAAAAAACCG ACTCTGCATT AACAAAATGG AGTTTTTGAG ATTTTTGCTT TCTCTCTTTA TAAAAGTTCT TCTGTTGAAT CTTTCCCTTT CTCATTTTCC GTTGATTTCA GGTCAAAGGA CTAACCACGA AGACTTCCTC AGGTGTCTCA CTCACCGGAT AAACGACCAC GAATCAAGAA TCATACACAC ATCAAAAGAT CCTTCCTTTT TCTCAATCTT GAATTCTTCC ATACAAAATC CAAGATTCTC TGTTCTTGAA ACACCTAAAC CGGTCTCAAT CATCACTCCG GTTCAAGCCA CCAATGTTCA ATCTACGATT AGATGCGCAC GGCTTCACGG TATCCACATC AGGACTAGGA GTGGTGGTCA TGACTACGAG GGCTTTTCTT ACATGGCCAA AATCAGACCG TTCGTTGTCC TTGATTTGAG AAATCTCCGG TCTATAACAT TAGATGTTGA TAACCGGACC GGTTGGGTTC AGTCCGGAAC TACAATTGGG GAATTGTACT ATAAGATTGG GAAATTGAGC AAATCTTTAG CCTTTCCGGC CGGTCTATAC CCAACGGTCG GTATCGGAGG GCAATTCGGA GGTGGAGGGT ATGGAACATT GATGAGAAAA TACGGTTTAT CGGCGGATAA TGTAATTGAC GCACATATCG TTGATGCGAA CGGAAGCTTT CTTGACCGAC AAGGCATGGG TGAGGATTTC TTTTGGGCTA TTCGTGGAGG GGGAGGATCG AGTTTTTGTG TTGTCCTATC ATGGAAGATT AGATTGCTCG ATGTTCCGTC GGTAGTAACG GTCTTTAACG TCGTGAAAAC ATCGGAAAAA GATGCTGTCT CGATCATCAA CAAGTGGCAG TATATTGCGG ATAAGGTTCC AAATGATCTT TTCATCAGAG CTATGTTGCA GAAGGAAACC GAGGTTTATG CTTCGTTTCC AGGACTTTAT CTCGGTCCGG TAAGCGATCT ATTAGCGTTA ATGAAAGATA AGTTTCCGGA ATTAGGTCTT GAGATTGGAG ATTGTAGAGA AGTGAATTGG ATTGAGTCTG TTCTCTGGTT TGTTAAAGAA CAATCAATGG AAACTCTTGT GAAACGAAAG CGAACCTCGA GATCTTTCAA GGGAAAAGAT GATTTTGTCG AAGAACCGAT ACCTAAACCC GCGATTCGGT ATCTTTGGAA ACGATTCGAG GCGCCCGAGG CTCGGCTTGC AAAGATCACA CTCACTCCAT TTGGTGGCAA AATGAGTGAA ATAGCGGAAT ATGAAACACC ATTCCCACAT AGAGAGGGGA ATCTTTATGA GATTCAATAT TTGGCTTATT GGAGTGAAGA AGAAGATAAG AACAAGACTA ATACAGAGAA GTATTTGAGA TGGGTGGAGA GTGTATATGA ATTTATGACT CCTTATGTTT CGAAATCTCC AAGAAGAGCT TATGTTAACT TTAGAGACAT TGATTTGGGA ATGTATCTTG GGATGAACAT GAAGACAAAG TACGAGGAAG CAAAGATTTG GGGAGTGAAG TATTTCAAGA ACAACTTCGA TAGATTGGTG AGAGTGAAAA CAAATGTTGA TCCAATGGAT TTCTTTTGTG ATGAACAGAG TATTCCAATT ATGAAATCTG TTAATGATAT TTGAAATTTT CAAATTTGTT TCCTTTGC 
Length1708
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3161414.. 3162602
Download Sequence
A.thaliana
AGI-codeAT5G44410.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
34.7707 Ahg496502 Pectin lyase-like superfamily protein
34.8999 Ahg488725 Protein of Unknown Function (DUF239)
37.3497 Ahg492392 HXXXD-type acyl-transferase family protein
44.6654 Ahg333419 Mitochondrial substrate carrier family protein
53.6936 Ahg934869 expansin A8
54.2218 Ahg483675 NAD(P)-binding Rossmann-fold superfamily protein
57.7927 Ahg483835 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
78.2624 Ahg484671 expansin A5
79.6806 Ahg490251 RNA-binding protein-defense related 1
85.9128 Ahg905436 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression