Detail



ID : Ahg488753

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488753|fgenesh2_kg.6__1887__AT5G18660.1
Sequence
CTTCACTTTC TCGCACTTTC CCTCTCATTT TCCCGATCGT CAAAACAACA TTGTACAGAG ATTTCAAAGC ATGTCACTTT GTTCTTCGTT CAACGTTTTC GCTTCATACT CACCAAAACC CAAAACCATC TTCAAAGATT CCAAATTCAT TGCACAATTT CAGGTAAAGT CGTCTCCTTT AGCTTCAACA TTCAAAACCC ATGAATCCTC AGAGACTCTT AAGTTTAAAA GAGCGAGACT CAAACCAATT TCATCTCTAG ACTCGGGAAT TTCAGAAATC GCTACATCGT CTTCCTTCAG GAACAAAAGC CCTAAAGATA TAAACGTTTT AGTGGTTGGT TCAACTGGAT ACATAGGTAG ATTCGTAGTG AAAGAGATGA TCAAAAGAGG GTTCAATGTG ACTGCTGTTG CGAGAGAGAA GAGTGGGATT AGAGGAAAGA ACGACAAGGA AGAGACTTTG AAGCAATTAC AAGGCGCCAA TGTGTGTTTC TCTGATGTTA CTGAGTTAGA TGTTCTTGAG AAATCTATTG AGAATCTAGG GTTTGGTATT GATGTTGTTG TGTCCTGTCT CGCTAGTCGT AATGGAGGGA TTAAAGATTC TTGGAAGATT GATTATGAAG CTACCAAGAA TAGTCTTGTA GCTGGGAAGA AGTTTGGTGC TAAGCATTTC GTTTTGCTCT CTGCGATTTG TGTGCAGAAG CCTTTGTTGG AGTTTCAGAG AGCGAAACTG AAGTTCGAAG CCGAGTTGAT GGATTTGGCG GAGAAACAAG ACTCGAGCTT TACTTACAGC ATTGTGAGAC CAACGGCTTT TTTCAAGAGC TTAGGTGGTC AAGTTGAGAT TGTGAAAGAT GGGAAACCTT ATGTGATGTT TGGAGATGGT AAGCTATGCG CTTGTAAACC GATCAGCGAA CAGGATTTAG CAGCGTTTAT AGCGGATTGT GTGTTGGAAG AGAATAAGAT CAATCAAGTT TTACCAATTG GTGGACCAGG GAAGGCGTTA ACGCCATTGG AGCAAGGAGA GATTTTGTTT AGGATTCTTG GGAGAGAGCC TAAGTTCTTG AAAGTACCTA TCGAGATTAT GGATTTTGTG ATTGGGGTTC TTGATTCTAT TGCAAAGATT TTTCCTTCGG TTGGAGAGGC TGCTGAGTTT GGGAAGATCG GGAGGTATTA CGCCGCAGAG AGTATGTTGA TTCTTGATCC AGAGACTGGA GAGTATAGCG AGGAGAAGAC ACCGAGTTAT GGGAAAGACA CGCTTGAGGA TTTCTTTGCG AAAGTGATCA GAGAAGGAAT GGCAGGTCAA GAACTCGGTG AACAGTTCTT CTAGTGTGAA ATTTTTATGC AAAATGAGTT TGGCTGTGTA GTTTGTAACT GATGTGATTA TAAATATAAA ATCTGTGAAT TTGAGAGATT TGTT 
Length1414
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7427265.. 7428680
Download Sequence
A.thaliana
AGI-codeAT5G18660.1
DescriptionNAD(P)-binding Rossmann-fold superfamily protein
TAIR curator summaryEncodes a protein with 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity. Mutants accumulate divinyl chlorophyll rather than monovinyl chlorophyll.
Alias[PCB2][PALE-GREEN AND CHLOROPHYLL B REDUCED 2]
Gene coexpression
MR
MR Locus Description
9.38083 Ahg484358 ribosomal protein L15
14.2829 Ahg474689 Phosphoglycerate kinase family protein
16.5227 Ahg486711 rotamase CYP 4
23.0651 Ahg492755 photosystem II subunit QA
25.0998 Ahg938418 CAX interacting protein 1
25.3969 Ahg486137 dicarboxylate diiron protein, putative (Crd1)
25.5734 Ahg485048 plastid transcriptionally active 16
26.1151 Ahg473693 Ribosomal protein L21
27.4591 Ahg940065 2-cysteine peroxiredoxin B
27.4955 Ahg484368 Thioredoxin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression