Detail



ID : Ahg488790

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488790|fgenesh2_kg.6__1924__AT5G19070.1
Sequence
TACGCGCCAC GCGGTTTAAT GTAACCAGTC ACAGTTCTTA TGCTTACGCT AAACATGGAG TCTCCAAACC AAATCAACGA CAATTGAATC CACACCTTCA CGAAACCCCC CAAAGTTTGT CTTTTTCGGT TTCGGATTAC ATCATCTCCA AGGCAAGCAC CAGCACCAGA TTTTCCGCAT CCTTAAAGAT CTCGTTGCGG TTTTTGTCGG AAAATTTCGG TTTGTTGTGG TTCCCGGCAA CGCCGTTGAA ATAGTCACCG GAGGCGATTT AGCATCGTAG AGTCGCCGTT CATGGCGTTC ACGTGGGGAT CTGCTCTCCG GATTTCTGTT CTCCTTATCC TTGTAGCTGC AATTGTCTTA GCTTGTTATT TTCTCCCCGT TGAGAAGCTA TTGAAGGATT TTTTGTTATG GGTTGAACAA GATCTAGGGC CTTGGGGACC TTTTGCCCTA GCTGTTGCGT ACATTCCTCT AACAGTTTTG GCTGTTCCTG CCTCGGTTCT CACGATCGGT GGTGGCTACC TTTTTGGGCT GCCAATTGGT TTTGTGGCGG ACTCAGTCGG TGCTACACTT GGCTCAGGAG CCGCATTTCT TCTAGGCCGT ACAATTGGAA AACCTTTTGT AGTTGCAAAA TTAAAGGATT ATCCTCAGTT TCAGTCAGTG GCACTCGCGA TTGAGAAATC CGGCTTCAAG ATATGCTTGC TGCTCCGGCT TGCTCCTCTT CTCCCCTTCA GCATGTTGAA CTACCTCTTA TCTGTAACAC CAATTCGGCT AGGTCCATAC TTGCTTTCTT CTTGGTTAGG GATGATGCCA ATAACACTTG CGTTAGTGTA TGTTGGAACA ACTCTAAAAG ACCTTTCTGA TGTAACTCAC AAGTGGAGCG AATTCTCGCT AGGCCGCTGG GCGTTCTTGA TTTCGAGCCT TGTAATATCC GTGATATTAA TGGTGTGTGT TACGAAGGTG GCGAAGGACG CTCTAAGAAA AGCTTTAGCA GAGCACGGAG GAGACATGAA CGAAGCGGTT GCAGCCTTGC CAGAGCTGAC CGTTACTGAT GATGCTTCGA CGGATTTAAA TGAGCCTCTC TTAATAAAGA TAGATGCTCA ACAACCTCAG GACCAAGTAA ACCATAGTCA TTAAAAACTT TGTATAATCT TTATCTTTAA CTTACAAAGC ATAGTTTTAT TGGTTTGTAT AATAACATAG ATTAAAAATT ATTTTTAAAA AGTTGTTTTT TCTTAATAAC TTTGAGATGT AATTATTAGT TCACAGGGAT TTAAAATATT GGATGAATAA AAAGAAACTA AATGG 
Length1305
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7628052.. 7630484
Download Sequence
A.thaliana
AGI-codeAT5G19070.1
DescriptionSNARE associated Golgi protein family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.9583 Ahg482474 Exostosin family protein
12 Ahg938412 plant U-box 14
13.2665 Ahg950731 C2H2-type zinc finger family protein
15.9687 Ahg474191 scarecrow-like 5
31.8904 Ahg472467 phytochrome-associated protein phosphatase type 2C
33.3167 Ahg924243 HSP20-like chaperones superfamily protein
34.7851 Ahg475258 NAD(P)-linked oxidoreductase superfamily protein
34.9857 Ahg471960 translocase of inner mitochondrial membrane 23
38.7298 Ahg494731 phosphatidic acid phosphohydrolase 2
39.3446 Ahg939877 Duplicated homeodomain-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression