Annotation |
Description | jgi|Araly1|489125|fgenesh2_kg.6__2259__AT5G22760.1 |
Sequence |
ATGGAAGGGA AGGTGGCTAG ACCTAGAGGT AGACCGAGGA AACGACCCAG GCCAGAGGAT CATAATGGGG TATCTAATCG AGGGAAGAGG CCGGTTTTAG AGATGAAAGT GGCTATACCT AGATCTCTTC TTGGTTGCTA TGTGTTGAAA GATCTTGATG ACTCTAGAGT TTTTCTTGGC AAGATAGTTT CTTACAAGAG TGGCTTGTAC AGAGTTGTAT ATGAGGATGG TGATTTTGAG GATTTGGAAA CTCGTTATCT TCGCCAGTTG ATTATTGGGG ATAGTTACTT TGATGATGAA TTACGTGCTA GAAGGAGTAA ATTAGACGAC TTTATACTGA AGAATGACGA AAAGAAGAAA ACAGATTGCT TGAAGAACAA AGGGGTTGAG GTTCCCACAT GTACTAGCCC AAGTCCTGTG GCAGAAGTTG AAAGTGGTTG TTGTTCACCT GAGTGTGAAG ATAACGTAGA TCCAGATTCC GAAACTATGT CTCCTCTTGT TCCACCAGTG GAGTTGCCTT CTTCATCAGG AACAATTGGT ATCCCTGAGG AGGCTGTGGT GTATCTATTA TCTGTATATG GGTTCTTAAG ATCATTCAGT GTTCAGTTAT ATATCTGCCC TTTTGGATTG GATGATTTTG TCGGAGCATT AAATTTCTTA GGACCAAATT CTTTGCTGGA TGCCATTCAT CTTGCCTTGA TGCGAGCACT CAAAGGTCAT CTTGAGAGAC TCTCCTCAGA TGGGTCTGAA GTGGCTTCAA AATGCTTGAG GTGCATTGAT TGGAGCTTGC TCGATGCGCT AACTTGGCCT GTTTATTTGG TTCAGTACTT TGCTGCCATG GGACATGCAA GTGGGCCTCT CTGGAGAGTT TTTAATGAAT TTGTTGTGGA GAAGGAGTAT TATTCGTCAC CCGTAGTAAT GAAGTTGAAG ATCCTGCAAA TTCTGTGTGA TGACGTCTTT GATGTAGCAG ATATAAGAGC TGAAATTGAT ACTCGAGAAG AATCTGAAGT TGGATTTGAT CCTGATGGAG TTACTGCTGA ACTTCCTGAA AATGGACCTA GAAGGGTCCA CCCCAGATTT GCTAAAACCT CAGCTTGCAA GGAGAAAGAG CTTAGTGAAT TTGTTGCAGT GAACCATGGC ATAAGTTCAC TGAACGAGTC AAAAAACTTG AGTTCAAGAT ATACTGATGG TGGTCCTAAT GGAGATAACT CAGATCTGGA TGGAAACAGT GATGAATGTA GGCTCTGTGG CATGGATGGA ACGTTGCTAT GTTGTGATGG ATGCCCTTTA GCATATCACT CAAGATGCAT CGGTGTGGTC AAAATGTATA TACCAGATGG GCCGTGGTAT TGTCCAGAAT GCACTATAAA AAAAATGGGG CCAACTGTTG CTCATAAAAC GTCACTCAGG GGAGCATTGT ATTTTGGAGT GGATCCACAT GGGCGACTCT TTTTGGGTAC ATGCAATCAC TTACTGGTGC TTAAAATTTA TGTCAATGCG GATGCAGATA TCAAATATTA CAATGTCACC GACCTTCCAA AAGTTGTCCT GGTGCTTTTG TCTGCAACGA ACCATAGAAT GGAATATCTG TATATATGCA AAGCGATCTC ACTATACTGG GATCTGCCTG GAGATGTGAT CTCTTATCTG AGAGCAGTAG AGACTGATTT ATCTCACATG CAAAAAGAAG GGGGTGGCGA GGTGTCAGAC ATAGTTAAGC CAGATAGTGC AAGTAATTCC AGTGGAAATC TTATTCAAAA TGCGGTTGGC CTCCACCCAT CTGCTTCAGG CTATGCTGGC GGTCCTGTTT TAGCAAGATT AAATGGAGCG CAAGAGAAGA ATTTGGTTGC ACTCAGTACA CAGAAGGGTT TATCTTTTAA ACCTCATGCT TACGTTAATC ATTACACAAA TGGAGAATTG GCTGCATCAG CTGGTGCTAC TTTGGCTGTC CTATTATCAG AGGAAACCCA TGAACCTGAT CTACACAAGT TTAGTAATGC CAAGAAAGCT GCTTCAAGTA ACATCTTGCT ACAGGTGAAA GCATTTTCGA TAGTAGCCTC GAGTTTCTTC TGGCCAAGTC CTGATAAGAA GGAAATTACC AGGGAAAGGT GTGGATGGTG TCATTCTTGC AAACTCACAT CAGCAAGTAG GAGAGGATGC ATGTTAAATG CAGCTGTAAC AGGGGCAACC AAAAGTGCTA TGAAAATCTA CAGTGGCCTT TTTCCTTTAA AGAACGGGGA GGGAGTACTT TCTAGTATCA CAGCATATAT CCTCTATCTC GAGGAAAGCT TACGTGGTCT CATTGCGGGG CCATTTCTTA TTGAGAGTCT TAGGTATCAG TGGCGTAAGA AGTTAGAGGA AGCTTCAACA TGCAAAGCGA TGAAATCCCT CCTGCTTGAA CTTGAGGAAA ACATTTGCAG TATTGCTCTG TCAAGCGACT GGCTTAAACA AATGGATGAT TGGTTGATAG AACATTCTAT CTTTCAAAGC GCTCCAGTTA CTGTTGGGGC CACACAGAAA CGTAGACCTG GTAAGAGGAA GCAGAGGAAC CAGGCTGAAA TTACAGCCCA AGGTTCTGAT GATGATAGCT TTACTTGGTG GCGAGGGGGG AAGTTATCAA AAGTTATACT CCTCAAGGCA GTCGTGTCGA AGCCTAAGAT AAGGAAAGCA GCTTGGCAAG GTGGTATGAA AAAGTTACCT GAATTTAATT ATGGTGATGG CTCTTACATT CCTAAAAGAA GCAGGCGGTC TATTTGGAAA GCCGCAGTTG AAAGTAGCAA AAACATTTCT CAGCTTGCTC TTCAGGTTAG ATACCTGGAT ATGAATATAA GATGGAGTGA ACTTGTACGC CCAGAGCAGA ACGTGCAAGA TGTTAAAGGT CCAGAGACAG AGGCTGCTAT TTTCAGGAAC GCTAGTATTT GTGACAAGAA GATTATAGAT AACAAGGTTA GATATGGAGT TGTCTTTGGG AATCAAAAGC ATCTTCCATC CCGTGTCATG AAGAATGTCA TTGAAGTCGA GAAAACTGAA GATAGAGACG AAAAGTATTG GTTTCATGAA GCACGCGTTC CCCTATATTT GATCAAAGAA TATGAAGAAA GTTTGCATAG GGTAAACATA CCTTTTATCA AGAAGCCATC AAGAAAAATA TCGAAGCTCC AGAAAAGGCA ACTAAAAGCT TCTCGAGCGA ACATATTTTC TTATCTAGCC TCGCGGAGGG ACAACACGGA GAAGTGTTCT TGTGCGTCAT GCCATCTCGA TGTTTTTTTG AGGGATTCAA CAACATGCAG TACTTGCCAA GGTTTCTGTC ACAAGGAATG TACTATGAGT ACACAACACA CAACTGGGCA GGTGGAAATT TTGGTAACCT GCAAACGGTG CTACCTTGCA AGAGCACGTT CACTAATCAA TATCAATCAC AGACCTCCAA CAACACCCAC TGTCCTGATC AACGGACAAG TTCAAAATGC AGTCACTTCA GTCACGAAGA CACAGATTAA GCCTCTTAAT CAACAGTTAC CATCTCCCAA AATACGCGAC AATGCTTCAG GAGTTAAACA AATCACTCCT GATTTCAATT TGGCACCGAA GAGTAAACAC AAGACATTGT CTTGGGGAGT CATATGGAGA AAAAAGAACT TGGCAGACAC AGGTGTTAGT TTCAGACATC AAAATGTTCT GTTTGGTGCA CGATCTGATC AGCCGAATCT GCAACCAGTT TGCTGGGTCT GCAAACTGCC GTATAATCCT GGCCTAACAT ATATTCACTG TACAAGTTGT GACAAGTGGT ACCACATTGA AGCGATTAAG CTCGAGGAGT CAAAAATTCC TGAAGTTGTT GGTTTCAAGT GTTGCAAATG CCGTCGTATA CGATCACCAG ATTGCCCTTA CATGGATCCC AAACTCAAGG AACAGAAGCA GATGAAACAA GTATTCTTCA GGAGGCAGAA ACATGGGCAA GGAAATATCG GAATGGATTC TGATTCCGAT AGAATGTCTG AACCGAAAGA CTCGATGCCC TCTACTCCCT CGTCTCTCTT CGAAGATATG TTTGTTCCAG AGGATGATCC TCTCTTGGTG TCAGTTTCTA AAATCGAACA AATTACACCT AACAGTTTGG ATGTGGACTG GAACGGGGAT GCTTCGGTGC CGGTACCCCA GAAGCTACAA GTTAGGAGAC AAGTGAAACG TGAAGAGACA GACGGGAATA ATAATCTTTC TTATAGCGAG TTTTCAATGC ATCCTGAATC AATGCCTGTT GTGAAACCAG AAATGGAGCC AACATTGCCT GTCATGGAAT GGGATGCATC TGGCAACAAC AACAACATGG TCGAAGGCGA GCTAATGTTT GACTACGAAG ACATGGAATT CGAACCCCAA ACATATTTCT CGCTGACCGA GTTACTCACA ACAGATGATA GTGGCCAGTA CGATGGATAT GGAGATGACA AGGATGCTTC AGGAATAACA GATAACCCAA ACCCTCAGGT TGAGGCAATG GAACAGTGCA CATCATTTCT CTATGACAAT ACAATTCCAT GTCAGATATG CATGCATGTG GAGCCAGGAC CTGATCTCAC ATGTCAGACT TGTACTATGA CAATACATTC CCACTGTTCT CCATGGGAGG AGGAATCTAC TTGCATAGGA GGTAGCTGGA GATGTGGTCG TTGCCGTGAG TGGGTGTAGG TGGCGGCTTT TCTCCTCCCA AAGTTAAG |
Length | 4718 |
Protein Sequence | |
Protein Residue | |
Map Location | scaffold_5: 10916548.. 10916827 |
Download Sequence |
|
A.thaliana |
AGI-code | AT5G22760.1 |
Description | PHD finger family protein |
TAIR curator summary | |
Alias | |
Gene coexpression |
MR |
MR | Locus | Description |
4.24264 |
Ahg495190 | Protein of unknown function (DUF3414) |
8.77496 |
Ahg888770 | F-box family protein |
9.27362 |
Ahg914725 | FAD/NAD(P)-binding oxidoreductase family protein |
12.2474 |
Ahg472334 | U5 small nuclear ribonucleoprotein helicase, putative |
16.1245 |
Ahg940610 | DNAse I-like superfamily protein |
16.7332 |
Ahg486254 | RING/U-box superfamily protein |
18.2209 |
Ahg488386 | U-box domain-containing protein |
20.7123 |
Ahg942216 | chloride channel D |
26.7208 |
Ahg472436 | serine hydroxymethyltransferase 6 |
26.8328 |
Ahg915270 | Homeodomain-like superfamily protein |
|
RNA-seq |
Seasonal expression (July 2011 to June 2013) |
|
The four seasons |
|
Growth Chamber expression |
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