Detail



ID : Ahg940610

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940610|scaffold_601154.1
Sequence
AAGCTTCGAA TTCGATTGAC CAATGCGGCG TTCTCGTTTT CTCGCCCAAG TTTTCTCCGA CGCTTCCTTC ACTGACGTAT CCACTACTTC TGCTCCAATC GTCGCCATGT CTACTCGTGC TCCGTACAGA GGTGGCCGAG GAAGAGGCCG AGGCGGGAGA AGTTTCTCCG ATCGTCCGTA CAATAATGAC GCAGGAAGAA GAGATCAGTT CGTTACTGGA GACTCGCATT TTCAGTCAGT TCATGACGCC AATCTCCGAT TCCGACATGG TGAATCTTAT CGACAACCTC AACCTCCGCT AGATCAGCGG CAGCAACCAC CGTTCAATCA GAATTACGAA TTTCGGCCTC GGCCGCCGTC TCGAGGTCAG TGGCAACAAT TTCGTCAACC TAATCATTTA CCGTCCAATC AAAGCTATGC GGCATACCCT CCCCCTCCGT TCTATCAAAA CCAAATGTCT CGGCCGCCTC CACATCAGAG CTTTCGTCAA CGGCCACGGT CAAAACCTTC AGATTACCGG GAATGGGAAT ATGCCAAAAC GCCACCGTCT CCTGGCTCCG AAAAGTTTGT TGTTTTATCG TATAATATCT TGGCGGATTA CCTTGCAAAT GATCACTGGA GAAGTCTTTA CTTTCACATA CCGAGGAATA TGTTGAGTTG GGGATGGAGA AAGAGCAAAT TAGTGTTCGA GCTTGGCCTA TGGTCTGCAG ATATAATGTG CCTTCAGGAA GTTGATAAAT TTCAGGATTT AGAGGAGGAG ATGAAGCACC GGGGATATAG TGCCATTTGG AAGATGCGGA CTGGTAATGC TGTTGACGGC TGTGCAATAT TTTGGCGATC AAATAGATTC AAGTTGGTTC ACGAGGAAAG CATCCAGTTC AATCAACTTG GTCTTCGGGA TAATGTTGCT CAAATATGTG TGTTTGAGAC ACTGTTGACT TCACATACAA AAGAAAATGA GACCCCTCCA CCTGAAAGCT CTGCTGGTTC CTGCCGAGTT GTCATTTGTA ACATTCACGT GCTTTTTAAT CCTAAAAGAG GAGACTTTAA ACTTGGTCAG GTCAGGACAC TCTTAGATAA AGCTCATGCT GTTTCAAAAC TCTGGGATGA TGCGCCTATT GTTCTTTGTG GGGATTTCAA TTGTACACCA AAGAGTCATT TGTACAACTT TATTTCAGAC CGGAAGTTGG ATTTGTCTGG TTTGGCCAGA GACAAAGTTT CGGGGCAAGT TTCTGCTGAG TTTCGTCCAC CAAGGCCAGA AAGTTATACG ACGAGGTTTC AGTCCGCCAA TAAATCTCCA CAAGGTCAAG TTCAACTACC AGATTCGATC ACAAATGCTC ATATGGAGAA TAACTCCAAC ATAGATGTTG AAACGCCCCC CTCCGAAAAG ACATCTGAGC TTCCATGTGG TGATACAATT CTTGCTGCTC ACGAAGCCAC CTCGAGCTCT GACCAAGTAT TACCAGGCGA GAATATGGCC TCAGATTGTA ATTTTGAAAT AGAAAACAGA AAACCTGATG ACTCCGGGAA TCTCTCGATA GCTGAAGATC TTTCTACAGT AATTATATCA GATACAGAAC CTCAACATGC TTCCAGTGCT AGAGAAGATT TGAATACAGA TCATTTTGTA AGTTCGGGTT TATCAGAAAC AGAGCATTCT CCTGAGGAAA TATGTTCCAG TGATCAAGGT ATTTCATCTA GTCTCTCCAC CAAGGTTGAC AATACTTTGG CTGAGATGAA ACTAGATGGC TTAAAATTGG ACGAACCAGT TGTATTCGCG CAAGATGAAG AAGTTTTAGG TGAAGATGGG GAAACCTTTT TGGCTAAGCT ACACGATTAT AATGAAGACT TGAGTCAAAA AGGGGAACTT GTGAATGATT TTTCACGTAA ATCGGGTTCT GAAGCTTTTA ATAATGAGAA AATCATGTAT AATCCATCCT CATGGACTCC AATGGAGATA GCAACTGCAA CAGGCGACCC AGAGAGAACT ACAGTTGAAC ACGCTCTGGA GCTTAAAAGC ACTTACTCAG AAGTGGAGGG TCAAGCGAAC ACAAGAGATG AAAACGGAGA GCCTGTAGTG ACCAGTTATC ACAGATGTTT CATGGGGACA GTTGACTACA TATGGCGGTC GGAAGCCCTT CAGACGGTTC GTGTGCTTGC TCCAATACCG AAACAAGCAA TGCAGTGGAC ACCAGGCTTC CCGACTCCAA AATGGGGAAG CGATCACATT GCATTGGTTT CAGAGTTGGC CTTTTGTACC AGCAAGAGTC CGCCTAAAGG CTGATATTAA ACAGGTGGTC ACTT 
Length2304
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4378439.. 4382829
Download Sequence
A.thaliana
AGI-codeAT5G11350.1
DescriptionDNAse I-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.64575 Ahg471159 SIN3-like 6
9.48683 Ahg485149
10.247 Ahg487064 Pentatricopeptide repeat (PPR) superfamily protein
12.7279 Ahg924045 calpain-type cysteine protease family
13.4164 Ahg477668 apyrase 1
16.0624 Ahg495654 RNA-binding (RRM/RBD/RNP motifs) family protein
16.1245 Ahg489125 PHD finger family protein
16.5227 Ahg480227 RNA helicase, ATP-dependent, SK12/DOB1 protein
22.8035 Ahg930461 FAD/NAD(P)-binding oxidoreductase family protein
24.8193 Ahg311783 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression