| Annotation |
|---|
| Description | jgi|Araly1|472436|fgenesh2_kg.1__2390__AT1G22020.1 |
| Sequence |
AATTCTCTTC TTCTCATCCA TAGCTTCCGA CGAGAGAAGA AGCAAAATTC GATTGCTCTG GGTTTTTGAT CTTTTAGGGT TTCTGTGAAA TTTGGATGGA AACTTCAACC TTATCTAAAG ATAATCATAA AGGAAGAAGC TTTCATTGTT TCCATTGTAT CAGCTCCTTC AAAAACTCTT GTCTCTATTG CTTTCACAGC TAAAGAATTC TTCTCGTTTT CGATTTTGGG GAATTGGGTT CTTCTAGGTT TAGGTTATGG ATCGTATTGC TCAATCAGAT CTCTCTTTAG GATTCGGTAG CTCCCACGCT TTACCTCATC CTCCGAGAAT CCCAATTGCT GATGACTCAA TCACGCTTCA GATTGATTCT AGCTTCCGTC CTTCGTCTAA TCCTATGCCT CCTGTTCCGC TTCAGTTGCT TGAGCAGAGA TTCGATGTTA CCGGATCGTG TAGCCGAGTC GTTGAGGAAG ACGATGATGT TGTTGGTGAT TATGATGAAG ATGATGATGA TGATCAAAGG CAATTTATTC TCTTGGGTCA TCCTATGAAG TTGAAACGAT GTAGAGGTGG GAATTCATAT TCAATGTCAT CATCAAGTAA GAGATTTGTA GTTGATTCAG GGATTGAAGG TAGACGAGCC GCCGTTAGAG CTTGGGGTAA TCAGTCGATT GAAGAAGCTG ATCCTGAGAT TCATGAGTTT ATGGAAAAGG AAAAGCAGAG ACAGTTTAGA GGTATTGAGC TTATAGCTTC TGAGAATTTC GTGTGTAGAG CGGTGATGGA AGCTTTAGGA AGTCATTTGA CTAATAAGTA CTCTGAAGGA ATGCCTGGAG CTAGATACTA CATGGGGAAT CAGTATATTG ATCAGATTGA GATTCTTTGC CAAGAGCGTG CGCTTGCAGC TTTTGGACTT CAACATGAGA AATGGGGAGT TAATGTGCAG CCTTATTCGT GCACTTCCGC CAATTTCGCT GTTTTCGCTG GTCTTTTGAT GCCTGGTGAA CGAATTATGG GATTGGATTC TCCCTCAGGT GGTCATATGA GTCATGGGTA TTACACGCCA GGTGGAAAGA AAGTCTCTGG TGCGTCTATA TTCTTTGAGA GTTTTCCGTA TAAGGTTGAT CCTCGTACAG GGTATATTGA TTATGATAAG CTTGAGGAAA AGGCGCTTGA CTATCGTCCC AAGATACTTA TTTGTGGTGG GAGTTCATAT CCGAGAGACT GGGAATTCCC TAGGTTTAGG CATATTGCAG ACAAATGTGG AGCTGTTTTG ATGTTTGACA TGGCACAGAT TAGCGGTCTT GTGGCTGCCA AGGAAAGTCC AAATCCATTC GATTATTGCG ATATTGTTAC CTCGACAACA CACAAGTCTC TCCGTGGACC TAGGGGCGGC ATCATATTTT ACAGGAGAGG CTTGAAGCCC AAGAAGCAAA GCATGAATCT TAATCACTGT GAGAGCAATA TCCAGTATGA TTTTGAAGAA AAAATCAACT TTTCTGTCTT TCCATCGTTG CAAGGCGGGC CTCACAATAA CCATATAGCT GCTCTAGCCA TTGCCCTCAA GCAGGCCGCT TCACCAGAGT ACAAGCTTTA CATGCGACAA GTAAAAAAAA ATGCCAAGGC TTTAGCATCT GCTTTGATAA GTAGAAAGTG CAAGTTGATA ACAGGTGGCA CCGATAATCA TTTGCTTCTC TGGGATCTGA CTCCTTTGGG CTTGACAGGT AAGGTGTATG AGAAAGTTTG CGAGATGTGC CATATCACGG TCAACAAAGT CGCCATTTTC AGCGAAAATG GTGTTATTTC CCCTGGAGGA GTGAGAATAG GCAGTCCGGC TATGACCTCA AGAGGTTGTT TAGAACCAGA ATTTGAGACA ATGGCTGAGT TTCTATATAG AGCTGCTCAG ATAGCTAGTG CTGCACAAAG GGAACACGGG AAGTTGCAAA AGGAACCGCT CAAAAGCATC TATCACTGTA AAGAGATTGC AGATCTTCGG AACCAAGTTG AAGCTTTTGC TACTCAGTTT GCAATGCCTG CCTTTGACAT GTGAGTCAGC CTGAAGAACG AGACCAGCTC AATCTCTCTC TCTCTCATTT TTTGTTGCCA TGGTAATCTA AATCCATACA CCCATTTCTC TATTTTACAA TGTCAACATT CCCTAAATTG GGGGAAAAAC AAACTTTTGT GAGTTGCTAT GGTCGTTTAT TCTTCAATGC TTGTGTACAT AGACATTGGG GCTGTGTTGG GTATTAGTGT ATCCCTTTGT GTTCTTTTAA AATGGTAATA ATAATGCAGT TGAAATTTTT TGATAGAAAA GGGAATAATA TTCTTTCAAG ATGTT |
| Length | 2335 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 9183682.. 9186732 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G22020.1 |
| Description | serine hydroxymethyltransferase 6 |
| TAIR curator summary | Encodes a putative serine hydroxymethyltransferase. |
| Alias | [SHM6][serine hydroxymethyltransferase 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8 |
Ahg482666 | glucan synthase-like 8 |
| 12.3288 |
Ahg495780 | CwfJ-like family protein / zinc finger (CCCH-type) family protein |
| 12.7279 |
Ahg923418 | Protein of unknown function (DUF620) |
| 15.1658 |
Ahg920696 | vacuolar protein sorting 46.1 |
| 17.4642 |
Ahg890636 | |
| 24.8193 |
Ahg922444 | D111/G-patch domain-containing protein |
| 26.5518 |
Ahg474768 | |
| 26.7208 |
Ahg489125 | PHD finger family protein |
| 26.7208 |
Ahg486680 | Protein with RING/U-box and TRAF-like domains |
| 33.4664 |
Ahg477303 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|