Detail


ID : Ahg489451

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489451|fgenesh2_kg.6__2585__AT5G26040.2
Sequence
CAAAAAAATA TCTCACCGCT TCAGACCAAA ACCTCATATG ACAGATACCC GAGTCATCTC GACCTGGACC GAGTTAACTC GCGACTCAGC TATTTACTTG CTCTTCACGT TTTTCGCCAT CAAAGTCTAC ATATTTCTCT TCTGCTGTAA TCGAACATCT GAATTGTCAT CGTTTTCGAT GGCGACTCAT CCCGAAGCTC TCCGGCGAGA ACGAATTATC AACAGCAAAC TCTACTTCGA CGTTCCTCTT TCAAAGGTTT CGATTATCTA TTCATCGGCG TATGATATTT CGTTCATGGG TATTGAGAAA TTGCACCCAT TTGATTCTTC CAAGTGGGGT AGAGTTTGCA AGTTCCTTGT TTCAGATGGG TTTTTGGAGG AGAAAGCAAT TATTGAGCCT CTTGAAGCTT CAAAGAATGA TCTTTTAGTG GTACATTCTG AGAACTACTT AAACAGCTTG AAAAGTAGTG CCACTGTTGC TAGGATAACC GAGGTTCCAC CAGTTGCCTT TTTTCCGAAT TTTCTTGTGC AGCAGAAAGT TCTTTACCCA TTCCGAAAGC AGGTTGGTGG GACGATTCTG GCAGCTAAAC TCGCAACAGA ACGTGGATGG GCAATAAACA TTGGAGGAGG TTTTCATCAT TGTACTGCGG AAAGAGGAGG CGGATTTTGT GCTTTTGCTG ATATTTCTCT TTGTATTCAC TTTGCATTTC TTCGTCTGCG AATCTCCAGG GTTATGATAA TAGATCTTGA TGCTCATCAA GGGAATGGCC ATGAAACAGA TCTCGGCGAT GACAACCGCG TTTACATTCT GGATATGTAC AATCCCGAGA TATACCCTTT CGATTATAGA GCTAGGAGAT TTATCGACCA GAACATTGAG GTCGTGAGCG GGACCACCAC CGATGAGTAT TTGAGGAAAC TAGATGAAGC CCTTGAGGTT GCTTCGCGAA ACTTCCAACC GGAGTTGGTA ATTTACAATG CTGGGACAGA TATATTAGAC GGTGACCCTC TGGGACTTCT AAAGATAAGC CCCGATGGCA TAACGAGTAG AGACGAGAAA GTCTTCAGAT TTGCAAGGGA GAAAAATATT CCTCTTGTGA TGCTAACTTC AGGTGGGTAC ATGAAGTCAA GCGCCAGAGT TATTGCGGAT TCCATTGAGA ATCTCTCACG TCAAGGGTTA ATCCAGACAC GACCGGAATA ATGTGTATAT TTGTATAGAG AGTTTAAGAG AGACCCTTAT GATGTGTTCG TCACCTTTGT ATATGTGTAC CTTTCCC
Length1277
Protein Sequence
Protein Residue
Map Locationscaffold_6: 11141974.. 11144472
Download Sequence
A.thaliana
AGI-codeAT5G26040.2
Descriptionhistone deacetylase 2
TAIR curator summaryClass III RPD3 type protein. Encodes HDA2, a member of the histone deacetylase family proteins.
Alias[HDA2][histone deacetylase 2]
Gene coexpression
MR
MR Locus Description
12.4097 Ahg911192
12.7279 Ahg479366 nucleolin like 2
16.7332 Ahg936117
22.6495 Ahg485438 Clathrin adaptor complex small chain family protein
23.2379 Ahg488515 glutamine synthetase 1;4
23.4307 Ahg476589
25.1992 Ahg908039 receptor kinase 2
34.1906 Ahg490700 cold, circadian rhythm, and RNA binding 1
37.229 Ahg471936 Metal-dependent phosphohydrolase
40.8656 Ahg489474 Major facilitator superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression