| Annotation |
|---|
| Description | jgi|Araly1|490700|fgenesh2_kg.7__133__AT4G39260.1 |
| Sequence |
GTTATTACGT CACACCTCTT CTATAAATTA AGGCTGCGTC TTATCATCCC AAATCATACA AGTCTCTCTC TCTCATTTTT CGAAACCCTA AAAAAAAATG TCAGAAGTTG AGTACCGGTG CTTTGTCGGC GGCCTTGCCT GGGCCACCCA AGATCAAGAT CTAGAAAGGA CCTTCTCACA ATTCGGCGAC GTTCTCGATT CTAAGATCAT TAACGATCGC GAGACTGGAA GGTCAAGGGG ATTCGGATTC GTCACCTTCA AGGACGAGAA AGCCATGAGG GACGCGATTG AGGAGATGAA CGGAAAAGAG CTCGATGGAC GTACCATCAC CGTGAACGAG GCACAGTCAA GAGGTAGCGG CGGTGGAGGA GGCCGTGGAG GCGGTGGAGG TGGTTACCGC AGCGGAGGCG GTGGCGGATA CGGAGGAGGA GGTGGTGGTT ACGAGAGACG TAGTGGAGGT TACGGATCTG GTGGAGGCGG TGGTGGCCGA GGAGGAGGAG GATACGGTGG TGGTGGTGGT CGCCGTGAGG GAGGTGGCTA CGGAGGAGGT GACGGTGGAA GTTACGGAGG AAGCGGTGGA GGTGGCTGGT AATCAAAGAT TGCCGATCTG TTTTTGGTTT AGATTTGGTT TTGTGTCACC GTTTGTCTCT GGTTTGGTTA TCGTTCGTTT GGTTTACTTT TTTGATGAAA CATATCGTTT AAAGTCTTCT TTGTCTGGAA CGAAATGTTA ATTCGCGTGT TGTTCACTAA ATTATAAGGT TTCCTCTTAA CCAGATTTGA GATTTTCC |
| Length | 788 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 435475.. 436593 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G39260.1 |
| Description | cold, circadian rhythm, and RNA binding 1 |
| TAIR curator summary | Encodes a glycine-rich protein with RNA binding domain at the N-terminus. Protein is structurally similar to proteins induced by stress in other plants. Gene expression is induced by cold. Transcript undergoes circadian oscillations that is depressed by overexpression of AtGRP7. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). |
| Alias | [ATGRP8][CCR1][GR-RBP8][GRP8][GLYCINE-RICH PROTEIN 8][cold, circadian rhythm, and RNA binding 1][glycine-rich RNA-binding protein 8] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg481974 | BTB/POZ domain-containing protein |
| 2.64575 |
Ahg313123 | UDP-glucosyl transferase 85A3 |
| 3.74166 |
Ahg484447 | CCR-like |
| 7.48331 |
Ahg941495 | nudix hydrolase homolog 24 |
| 8.12404 |
Ahg936117 | |
| 9.05539 |
Ahg346360 | cytochrome P450, family 704, subfamily A, polypeptide 2 |
| 13.1149 |
Ahg481034 | cold, circadian rhythm, and rna binding 2 |
| 13.4536 |
Ahg481779 | Chloroplast-targeted copper chaperone protein |
| 13.9642 |
Ahg344726 | |
| 15.4919 |
Ahg494005 | Ribosomal protein S4 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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