Detail



ID : Ahg489762

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489762|fgenesh2_kg.6__2896__AT4G08590.1
Sequence
TCGAAATGGC GCGTGACAAC CAGCTTCCAG GCGACGGCGA CGGTGTATCC ACGCCGGAGG AATCCCTCAC TTACCGCACG TGCGATACCC CTTCGCACGT GACCTGCGTT TCATCTCCTC CTCTTGATCG CTCCGGCGAT GTTGATCCTC TTCCTGTTTC CGGCATCGGG GGACACGAAT CTGGTGGCTC AAAGGCCGAT GAGTCTATGA TTGACACAGA TGAGACTAAA AAGAGGAAAC GGTTACTCAG TGGTGAGGAA AAGAGTGACG GAGAAATCAC GAGTCTCGAT GACCGTGTTG ATGTCTTCGC TGCGATTTGT GAAGACTTGA ATTGTTCTTT GTGTAATCAA TTGCCTGATA GACCCGTTAC GACACAATGT GGGCACAACT TCTGCTTAAA ATGTTTTGAG AAGTGGATTG ATCGAGGGAA TGAAACGTGT GCAAAATGTC GTAGCCCAAT TCCCGATATA ATGGCAGGCA ATCCTCGTGT TAACTCGTCC CTCGTGCCTG TTATCCGTTA TGTAAAAGTT GCTAAAGGTG CTGGTGCTGG AAATGCAAAT TTTTTTTCTT TTACAAGCAA CCAAGGTGGT CCAGAGAATG CTTTTAGAAC CAAGCGCGCA AAAACTGGGA GGGCGAATGC TGCATGTGGA AGGATATATG TTACTGTACC ATTTGATCAC TTTGGTCCTA TACCAGCTGA AAATGATCCT GTCAGGAACC AAGGTGTTTT AGTTGGAGAA TCCTGGAAGG ATCGAGTCGA ATGTCGGCAG TGGGGGGCTC ACTTCGCACA TGTTTCTTGC ATTGCTGGAC AATCAGACTA CGGAGCTCAA TCTGTAGCAA TCTCTGGAGG TTATAAGGAT GACGTGGATC ATGGAGAATG GTTTCTATTC ACAGGAAGGG GAAGGAGAAA TTTCAATAAC GAGGATCAGG AGTTTGAAGA ATTGAATGAA GCTTTAAGAG TTAGTTGCGA AATGGGGTAT CCAGTTCGAG TTGTCAGGTC TTACAAGGAG AAGCATTCTG CATATGCCCC TGAGGAAGGA GTGAGATATG ATGGTGTCTA CAGGATCGAG AAATGCTGGC GAAAAGCTAG ATTCCAGGAT TCCTGTAAGG TCTGTCGTTA CCTGTTTGTG AGATGTGACA ATGAGCCAGC TCCATGGAAC AGTGATGAGA ATGGAGATCG TCCAAGACCT TTGCCTAATA TTCCAGAGCT TGAAACTGCC ACAGACCTGT TTGAGAGAAA GGAAAGTCCA TCTTGGGATT TTGATGAAGC TGAGGGCCGT TGGAGATGGA TGAAGCCTCC ACCTGCTAAT CATGAGCAGA GGAAGAGAAT GAGGATCGCT ATGACATGTC TTCTCCTTTT TGTCATGATC ATTTTTGTTG GTTCATCATC TATCTTATAC CGGGTTTAGA AGAATCACCG GCAAATAACT TGTTCTTTTG GTTTGATGAT CCCTTAGTTA TCTTCTTGTA CCAAAACAGT CTTCTCTAGT TCTCTCACTA CTCGTCTTGG ATACTTGAGG TTCT 
Length1524
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT4G08590.1
DescriptionORTHRUS-like
TAIR curator summary
Alias[ORL1][ORL1][ORTHL][VIM6][ORTH-LIKE 1][ORTHRUS-LIKE 1][ORTHRUS-like][VARIANT IN METHYLATION 6]
Gene coexpression
MR
MR Locus Description
10.0499 Ahg315436 Zinc finger (C3HC4-type RING finger) family protein
11.4018 Ahg481471 heat shock transcription factor A2
16.6132 Ahg492313 mitochondrion-localized small heat shock protein 23.6
16.7332 Ahg937331 heat shock protein 17.4
21.5407 Ahg487773 mitochondrial HSO70 2
21.9089 Ahg480033 rotamase FKBP 1
21.9089 Ahg321182 Protein kinase superfamily protein
26.5895 Ahg488044 17.6 kDa class II heat shock protein
28.8444 Ahg314711 HSP20-like chaperones superfamily protein
28.9828 Ahg332502 Major facilitator superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression