| Annotation |
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| Description | jgi|Araly1|321182|fgenesh1_pm.C_scaffold_4001239 |
| Sequence |
ATGTTACGAG AATCAGACGG TGAGATGAGT TTAGGAACAA CAAACTCACC GATAAGCAGC GGAACAGAGA GTTGCAGTAG TTTCAGCCGG TTATCATTCG ACGCGCCGCC GTCAACCACC GCGATTATCC CCGAAGAAGA AAGCTTCCTA TCTCTCAAAC CTCACCGATC CTCAGATTTC GCTTACGCAG AGATCCGACG ACGAAAAAAA CACGGTCTAA CTTTCCGAGA TTTTCGCCTC ATGCGTCGTA TCGGCGCCGG AGACATCGGA ACAGTTTACT TATGTCGTCT CGCCGGAGAC GAAGAAGAGA GCCGGAGTTC GTATTTCGCT ATGAAAGTCG TGGATAAAGA AGCGCTTGCG TTGAAGAAGA AGATGCATAG AGCAGAGATG GAGAAAACGA TCTTGAAAAT GCTTGACCAT CCTTTTTTGC CGACCCTTTA CGCTGAGTTT GAAGCGTCAC ATTTCTCTTG CATCGTTATG GAGTATTGCT CCGGCGGTGA TTTACACTCT CTCCGTCATA GACAGCCTAC CCGGAGATTT TCCCTCTCAT CCGCCAGATT TTATGCCGCC GAAGTTCTAG TGGCGTTAGA ATATTTACAC ATGTTGGGTA TCATCTACAG AGATCTGAAG CCTGAAAATA TCTTAGTTAG ATCGGACGGT CACATTATGC TCTCGGACTT TGACCTCTCC TTATGCTCCG ACTCAATCGC AGCCGTTGAA TCTACCTCAT CGTCGCCGGA GAATCACCAA CTCCGTTCAC CGCGACGACT CACTCGTCTG GCTAGACTTT TCCACCGAGT CATGCGGTCT AAAAAGGTTC AGACTTTAGA ACCAAACCGT CTCTTTGTTG CTGAACCGGT TACCGCCCGG TCCGGTTCGT TCGTTGGTAC GCATGAGTAC GTGGCACCAG AAGTAGCTTC AGGTGGATCA CATGGTAATG CCGTTGACTG GTGGGCCTTT GGAGTGTTTC TCTACGAGAT GATATACGGC AAGACTCCGT TCGTTGCGCC GACTAATGAC GTCATCCTCC GTAACATTGT GAAAAGACAG TTGAGTTTCC CGACTGATTC GCCGGCGACT ATGTTTGAGC TTCACGCGCG GAATTTGATT TCCGGGTTGC TTACCAAAGA TCCGACTAAA AGACTCGGGT CTCGGCGTGG TGCGGCGGAG GTTAAAGTAC ATCCTTTTTT CAAAGGTCTA AATTTTGCGC TCATACGTAC ACTTACTCCG CCGGAGATTC CTTCGTCCGT CGTCAAGAAG CCGATGAAAT CGGCGACGTT CGGTGGTAGG AGTAGTAACA AACCAGCGGC GTTCGATTAC TTTTGA |
| Length | 1326 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 15558171.. 15559812 |
| Download Sequence |
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| A.thaliana |
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| AGI-code | AT2G34650.1 |
| Description | Protein kinase superfamily protein |
| TAIR curator summary | Encodes a protein serine/threonine kinase that may act as a positive regulator of cellular auxin efflux, as a a binary switch for PIN polarity, and as a negative regulator of auxin signaling. Recessive mutants exhibit similar phenotypes as pin-formed mutants in flowers and inflorescence but distinct phenotypes in cotyledons and leaves. Expressed in the vascular tissue proximal to root and shoot meristems, shoot apex, and embryos. Expression is induced by auxin. Overexpression of the gene results in phenotypes in the root and shoot similar to those found in auxin-insensitive mutants. The protein physically interacts with TCH3 (TOUCH3) and PID-BINDING PROTEIN 1 (PBP1), a previously uncharacterized protein containing putative EF-hand calcium-binding motifs. Acts together with ENP (ENHANCER OF PINOID) to instruct precursor cells to elaborate cotyledons in the transition stage embryo. Interacts with PDK1. PID autophosphorylation is required for the ability of PID to phosphorylate an exogenous substrate. PID activation loop is required for PDK1-dependent PID phosphorylation and requires the PIF domain. Negative regulator of root hair growth. PID kinase activity is critical for the inhibition of root hair growth and for maintaining the proper subcellular localization of PID. |
| Alias | [ABR][PID][ABRUPTUS][PINOID] |
| Gene coexpression |
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| MR |
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| RNA-seq |
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Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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