Detail


ID : Ahg489908

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489908|fgenesh2_kg.6__3042__AT4G10610.1
Sequence
TTCATTGTAT TCCTCAAATC TCTTTACTTG ATCGTTGGTT CTCTCAAAAA TCAGATTTTT ATTTCTGGGT TTTGTTCGAA ATTTTCTGAT CATGGCGGTC ATTGAGAGCG TCGGAGCTAA TACTACGGTG GAAGCTGGTG GTTTGATCTC GCCGTCGCCG CCGTCTTCCG TCACCAGTCA AGAATCAGGA GTCTCTTCTA ACAACGATCA CGGTGGAAAT GAAATCCACG GTGAGATCGG AGTCCACGTG GCGAGATCCG ACGGTGATGA GAGTTTTAAG CGTGATATGA GAGAGCTTCA TGAGCTCTTG TCTAAGCTTA ATCCCATGGC TAAAGAGTTT GTTCCTCCTT CACTCACTAA GCCAGTTGTT AATGGTTTTA ACGGTGGTTT CTTCGCCGTT AATAATGGCT TTGGTGCTGC CGGAAATTTC CCCGTTAACG AAGACGGTGG TTTTCGCCGT AAGAAGTCGT TCGGACAACA AGGGAAAAGG AGAATGAATC CTAGGACAAG TTTGGCTCAG CGTGAAGAGA TCATTCGAAG AACTGTCTAT GTGTCTGATA TTGACCAACA GGTCACTGAG GAGCAGCTTG CTGGTTTGTT TATCGGCTTT GGACAGGTTG TTGACTGTCG TATATGTGGT GATCCCAACT CAGTACTTAG GTTTGCTTTC ATTGAGTTCA CTGATGAAGT GGGTGCAAGG GCTGCGCTGA GTTTGTCTGG GACGATGCTG GGATTCTATC CTGTGAAGGT TATGCCGTCT AAGACAGCTA TTGCACCGGT TAACCCGACA TTCTTGCCAA GGACTGAAGA TGAGCGTGAG ATGTGTGCGA GAACTATCTA CTGCACTAAC ATCGACAAGA AGCTCACTCA AGCAGACATA AAACTCTTTT TTGAGTCTGT GTGTGGAGAG GTGTACCGTC TGAGGCTGCT CGGCGATTAT CATCATCCAA CTCGCATTGG TTTTGTGGAG TTTGTCATGG CTGAAAGTGC GATAGCTGCT CTGAACTGCA GTGGCGTCCT TCTTGGCTCT TTACCGATAA GGGTGAGTCC GTCAAAGACA CCTGTTCGTT CCCGTGCTGT CCCGCGACAA CAAATGCATT AACCGTAGTA GCTACAAGTT TTATAAATAT TTCTGCTCCT CACAGACATG TAAAGAATGT TTGTCTGAAA CTTCTGGTTC TTTTGTTTTC CCTTATGTAA TGCTAGAAGC TTGATGATGC TTCTGTTGCC TTTTGCTTTT GGGTAAATCT CTTAGGGAGA GGTTTTTTCG ATTTGGGTTC TTACGTTTAG AAGTTACACA GAGCAGAAGA GTATAAAAGA CTGAGAGAGG CTTTTGAAGA TTGTCTCTGT TTTTAGTTAT TTATACTCTC TTACCCCTGA AGTTATTAGA AACTTGCTTT TGTGCTTAAA TGTTTC
Length1416
Protein Sequence
Protein Residue
Map Locationscaffold_6: 19355205.. 19357496
Download Sequence
A.thaliana
AGI-codeAT4G10610.1
DescriptionCTC-interacting domain 12
TAIR curator summaryRNA-binding protein, putative. Member of a family of proteins having an PABC binding domain (PAM motif).
Alias[ATRBP37][CID12][RBP37][CTC-interacting domain 12][RNA-BINDING PROTEIN 37]
Gene coexpression
MR
MR Locus Description
11.4455 Ahg481564 DNAJ heat shock N-terminal domain-containing protein
12.49 Ahg938681 Tetratricopeptide repeat (TPR)-like superfamily protein
12.6491 Ahg488686 Protein kinase family protein
20.2978 Ahg935759 Adenine nucleotide alpha hydrolases-like superfamily protein
26 Ahg945213 NAD(P)H dehydrogenase B1
27.2029 Ahg481139 peroxisomal NAD-malate dehydrogenase 1
29.6648 Ahg476259 Vps52 / Sac2 family
30.1496 Ahg484959 Polyketide synthase, enoylreductase family protein
31.4643 Ahg473945 calcium-dependent lipid-binding family protein
36.2077 Ahg478080 Protein of unknown function (DUF3755)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression