Detail



ID : Ahg489959

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489959|fgenesh2_kg.6__3093__AT4G11240.1
Sequence
AATAATTACC GCGTTTATGA AAAATTTCTA GGGTTTACGA AATTTGGGGT CTCTCTCTAC TTAACGCTCT CTGTATCTTC TTCTCCGTCA ACGATACGAA CCCAGAGACG CCGGCGGTGA AATAAATCGT CGGTTCTCTC TGGATTCGTC AGGCGAGAAT TTTCCGGTTT CTAATTTGTG TGTGTGAGAA AAAGATAGGG GTTGTTGCTT CGATGGACGA GACTTTACTC GACGATATAA TACGGCGACT TTTGGCGACG AATAATGGAA GGACGGTGAA GCAAGCACAG ATTACTGAGG CGGAGATACG GCAGCTATGT TTAGCTTCCA AGGAAGTTTT TCTCAGTCAG CCTAATCTCC TCGAGCTTGA GGCTCCTATC AAGATTTGCG GAGATGTTCA TGGTCAGTTT CCAGATCTCT TGCGGTTGTT TGAGTATGGT GGCTATCCGC CAGCTGCAAA TTACTTGTTT CTCGGGGACT ATGTTGATCG TGGTAAGCAG AGCATAGAGA CGATATGTCT TCTTCTTGCC TACAAGGTCA AATACAAGTT CAACTTCTTT CTTCTCAGAG GCAATCACGA GTGTGCTTCA ATCAATCGTG TATATGGATT CTATGATGAA TGCAAACGAA GATATAATGT CCGCCTATGG AAAACTTTCA CTGAGTGCTT CAACTGTCTG CCTGTTTCTG CTCTCATTGA TGATAAGATC CTCTGTATGC ATGGTGGACT ATCGCCTGAT ATTAAGAGCT TAGATGACAT CAAGAGAATT CCTCGTCCTA TTGACGTTCC TGATGAGGGC ATTCTTTGTG ATTTGTTATG GGCTGATCCT GACAGAGAGA TTGAAGGCTG GGGGGAGAAT GACAGAGGTG TCTCTTATAC ATTTGGGGCC GACAAAGTAG CTGAGTTCCT TCAAACTCAT GACCTTGACC TTGTATGCCG AGCTCATCAG GTTGTAGAAG ATGGATATGA ATTCTTTGCG AAAAGACAAC TGGTGACAAT ATTCTCTGCA CCCAATTACT GTGGCGAGTT TGACAATGCC GGCGCATTGA TGAGTGTTGA TGATAGCTTA ACATGTTCAT TCCAAATCCT TAAGGCATCT GAGAAGAAAG GAAGATTTGG ATTCAACAGC CATGTTCCTA GACCAGGAAC CCCACCTCAT AAGGGTGGAA AAGGTCGTTA ATCAAGAAAA GAGTGAAGCC GATGGGTTCG AATTTTGAAA GGCAACAGTT TGTTTTTGGT TGAGGCAACA TTATGTTTTG TAAAAATTGT GGAAGATGTT CACAGCATTT TCAACTGAAG AAAGTTGGGT TGGGTTTATA CATCTAACCT TTT 
Length1333
Protein Sequence
Protein Residue
Map Locationscaffold_6: 19705775.. 19707886
Download Sequence
A.thaliana
AGI-codeAT4G11240.1
DescriptionCalcineurin-like metallo-phosphoesterase superfamily protein
TAIR curator summaryencodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers.
Alias[TOPP7]
Gene coexpression
MR
MR Locus Description
13.9284 Ahg487806 Putative endonuclease or glycosyl hydrolase
19.0263 Ahg491436 La protein 1
24.2899 Ahg495827 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
34.4238 Ahg480240 Minichromosome maintenance (MCM2/3/5) family protein
40.4351 Ahg480100 anaphase-promoting complex/cyclosome 2
41.5692 Ahg496691 regulatory particle non-ATPase subunit 5B
44.4972 Ahg890991 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
49.0714 Ahg941736 P-loop containing nucleoside triphosphate hydrolases superfamily protein
49.1121 Ahg481305 Zinc finger protein 622
64.436 Ahg482921 Acyl-CoA N-acyltransferases (NAT) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression