Detail


ID : Ahg490225

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490225|fgenesh2_kg.6__3359__AT4G03390.1
Sequence
TGAAGAACTT TAACTCTTTC TTAAACCCAA ATTTCTGAAT TTCTCCAGTT CTTTCTTCTT AATTCGCAGG TTTTGGTCCC TCCGCTGAAA TTAGGAAAAA GTTTCCTTTT TTCGTTCTGG GTTTTGGTCT TTTTCTTCTC TGATTAGTAT TCCTCGAGTG TCGAGCTTTA TTCTCAAGTG TCAAATTATT GAGAGGGTAA AATTTACTTC AACGACGAAA GTTCATTGAA CCTTAGCTCT TACGTTGCGT CTTAAATCTC ATTCTCACCC ACATAAACAA AAACATAAAG TTTGCATTTT TTTCAGGATT GGGTTTTTGG GGAATTTAAA GGACAATACT TTACCTTTTT TTCACCAACC ATTGAGCTCG TTGATGACGA TCCCTCTACT TTTCCAATTC GTAGACATCG TTTTGTTCGA TTGATGTGTT GCTTTTAACT CCACTCTGAC TTGGAACAAT GGCTGCTAAG AGATCTATCT ACTGTCTTCT TCTTCTTCCT CTGCTCTTGT CTTTACTGAT CTGGATTCCT TCGATCTCTT TAGCTGCTAC TAACCCTGCT GATGTTGCTG CAATTAACGG ATTATTCGCT GCCCTTGGCG CACCTGTTCT TCCTGGTTGG ATTGCTTCTG GTGGAGACCC ATGTGGTGAA GCTTGGCAAG GCATTATCTG CAATGTTTCA GATATAATAA GCATAACTGT AAATGCTGCA AATTTGCAAG GAGAGCTTGG TGACAACTTA GCTAAGTTCA CTTCTATCAG GGGAATAGAT TTCAGCAACA ATCGCATTGG AGGAAGCATA CCTTCTACTT TACCGGTTAC ATTGCAGCAT TTTTTTCTTT CAGCTAATCA GTTCACCGGA AGTATCCCAG AATCTCTAGG AACATTGAGT TTTCTGAATG ACATGTCTTT GAACGATAAC CTTCTCTCAG GAGAGCTGCC TGACGTGTTT CAAAACCTTG TCGGGCTGAT TAATCTTGAT ATATCATCTA ACAATCTAAG CGGCACATTG CCTCCTTCAA TGGAGAACTT ATCAACTCTT ACAACATTAC GTGTTCAGAA CAATCAGCTC TCAGGAACTC TGGACGTCCT TCAAGGCCTT CCTCTTCAAG ACTTAAACAT AGAGAATAAC CTCTTCTCTG GACCCATACC GGACAAATTA CTAAGCATTC CGAAATTCCT AAATGAAGGA AACCCGTTCA ATGCCACCAC AATCAATTCC ACCTCGACTG CACCATCGTT GTCTCCGTCT ATGTCTCCAA CAAAACCAGC TCCAACGCGA CCGTTTTCTG GAGTTCCACC TCCTCCAACT GAGAGGAATC GAGGGAAAGT TGCTGATGGA CCTTCTGATT CAGAAGGATC GAGTTCTGAG AATTCAAAGG GAAAGAACTC TTCACATACT AAAAGGATAA TCCTTCTTGC ATTCGCTGGC GTCCTCGTCT TCATAATTCT GGTTTTGGCA ATACTCTTGC TGTTGCCAAA ATGTGCAAGA CGAAGAGAAC ATGCTAACAG AGTCTTCAAA CCGCATCAAG TTGGTGCTGA TAGAGGAAGC AGAGAGAATG CTCTGGAAAA TGGGCTTCCA GTACCGCCAC CACCTGCTCG ATCTGAAAAA GTTCAAAGGG AACCCTTCAA GAAAGCTGGA GAGGAACCAA AGGTTTTACA TGACCTTGAG AGGTTGCGGA GACCTGCGCC TATATCAAGA CAGGAAAGTC AAGATATTGA CTTTTCAATG TTGATGCCTC CTCCTCCGCC ACCTCCTCCA CCGCCACCAC CTCCTCCTTT GGCTGAGAAG GTCTCCGTTA TGCCAATTAT ATCACCCGAA AGACCCGTTA AGAAACCTTC CCCTAAACGC TTACCCTTAA CTTCTGTGAA GCACTACTCT ATTGCATCTC TTCAACAATA CACAGAAAGC TTCGCTCAGG AAAATCTCAT TGGCTCAGGC ATGCTCGGGA GTGTTTATAG GGCCCGGCTT CCCAATGGAA AGTTGTTTGC TGTCAAGAAG TTGGACAAGA GGGCTTCTGA ACAACAACAG GATCACGAAT TTATCGAACT AGTGAACAAT ATAGATAAGA TTCGCCACTC CAATATCGTT GAACTTGCGG GTTACTGTGC TGAGCACGAT CAAAGACTAT TGGTCTACGA ATATTGCAGT AACGGTACGT TACAAGACGG GTTGCATTCA GACGAAGAAT TCAAGAAGAA ACTTTCGTGG AATACCCGTA TCAGTATGGC ACTTGGAGCT GCTAGAGCCC TTGAGTACTT GCATGAGGTG TGTGAACCAT CTATCATACA CAGAAACTTC AAATCAGCCA ATGTTCTACT CGACGATGAC CTGAGTGTTC TTGTCTCAGA TTGTGGTTTG GCCCCACTAA TATCATCAGG CTCTGTGAGT CAGTTATCAG GACAATTGCT AGCCGCTTAC GGATATGGAG CTCCAGAGTT CGACTCTGGA ATCTATACAT GGCAGAGTGA TGTATATAGT TTTGGTGTTG TTATGTTAGA ACTCTTGACG GGTAGAATGT CCTATGATAG GGACCGGAGT AGAGGAGAGC AGTTCTTGGT GAGGTGGGCA ATCCCTCAGC TTCACGATAT TGATGCATTA GGGAAAATGG TTGATCCATC TCTCAATGGA CAATACCCTG CAAAGTCGTT GTCACACTTT GCTGATATAA TTTCCCGGTG TGTTCAGTCT GAACCAGAAT TCAGACCATT GATGTCAGAA GTTGTTCAAG ATCTACTAGA TATGATCAGA AGAGAGCGTC ATGGTTCGGG TGATTCTACC GCAGACTAGT GAATTGTAAA GAAGCATTTT TTATCGGATC ATCTCTGTGA ATTCGTGGAA ACAAGAGATG TTCAGTTCTC AGAAACAACA ACATAGGGAA CTAAACCAGA CACATAAAAA AAAAGGAGGC TTAAGCTGAT TCTACAGCCA AGAAGAGGAC TCTAAGGAAA AGGATCAATG TGGCTTGCTT CCAATGGGGG ATGATTCGAT TGGTGCAGAG TTTCTTTTTG TGAATCTTGA ATCATCTCTT TTAGTAATAT TTGTTGGTTG AAGACCTCAA CTGTAAAATG GTGTGTTTAC TCGATTCTTT GAACTTGTTT TACTTAAAGC TCATAGAACT TGCTCTGTGT TATATTCTTT TAGTATGTGT GTGACTTTGT GTATTTGTAC CTGTAA
Length3176
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21779556.. 21784200
Download Sequence
A.thaliana
AGI-codeAT4G03390.1
DescriptionSTRUBBELIG-receptor family 3
TAIR curator summary
Alias[SRF3][STRUBBELIG-receptor family 3]
Gene coexpression
MR
MR Locus Description
6.9282 Ahg478740 mitogen-activated protein kinase kinase kinase 7
11.4891 Ahg930194 IQ-domain 5
16.7332 Ahg472942
27.4955 Ahg928500 Clathrin, heavy chain
40.7676 Ahg472400 Calcium-binding EF hand family protein
40.8901 Ahg480585 F-box/RNI-like superfamily protein
42.4971 Ahg938850 DNAse I-like superfamily protein
43.7607 Ahg492627 SWIB complex BAF60b domain-containing protein
49.5681 Ahg934330 ATP binding cassette subfamily B1
51.7011 Ahg485507 Malectin/receptor-like protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression