Detail



ID : Ahg490280

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490280|fgenesh2_kg.6__3414__AT4G02770.1
Sequence
ATCTCTTTTC TCTTCTCATC AAAACATACC ATCAAGCAAT TTGCTCATTA GAGAACAAAG AAAGAAAAAA ACAATGGCAA CTCAAGCCGC CGGGATCTTC AACTCCGCCA TAACAACCGC CGCAACCTCC GGCGTCAAGA AACTCCACTT TTTCTCAACA ACCCACCGTC CGAAATCCCT CTCCTTCACC AAAACCTCAA TCCGCGCCGA GAAAACAGAT TCCAAAGCCG CTGCAGCCCC CGCCGTGAAA GAAGCTCCCG TGGGATTCAC GCCACCGCAG CTAGACCCAA ACACACCGTC TCCGATCTTC GCGGGAAGCA CCGGTGGTCT TCTACGTAAA GCACAAGTGG AAGAGTTCTA CGTTATTACA TGGAACTCAC CAAAAGAACA GATCTTTGAG ATGCCGACAG GAGGTGCAGC GATCATGAGA GAAGGTCCGA ATCTGCTGAA GCTAGCGAGG AAAGAACAGT GTTTAGCTTT GGGGACAAGG CTTAGATCCA AGTACAAGAT TACCTACCAG TTTTACAGAG TGTTTCCTAA TGGTGAGGTT CAATATCTTC ATCCTAAAGA TGGTGTTTAT CCAGAGAAGG CGAATCCAGG AAGAGAAGGT GTTGGTCTGA ACATGAGATC TATTGGGAAA AATGTTAGTC CCATTGAAGT TAAGTTTACT GGCAAACAAA GTTATGATTT GTAAGATAAA ACTATGTGCA TGTGATGATG ACTATGTTTC ATGTTAATTT TTAATGGATT TTGTTTCAAT CATTT 
Length765
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22035154.. 22035935
Download Sequence
A.thaliana
AGI-codeAT4G02770.1
Descriptionphotosystem I subunit D-1
TAIR curator summaryEncodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD1)
Alias[PSAD-1][photosystem I subunit D-1]
Gene coexpression
MR
MR Locus Description
1 Ahg473640 photosystem I subunit F
3.4641 Ahg475174 photosystem I light harvesting complex gene 3
3.4641 Ahg475878 photosystem II BY
3.87298 Ahg485905 photosystem I light harvesting complex gene 1
6 Ahg915184 photosystem I subunit l
6.32456 Ahg951584 PS II oxygen-evolving complex 1
6.48074 Ahg480223 photosystem II subunit X
7.07107 Ahg474626 photosystem I subunit G
7.93725 Ahg474340 photosystem I subunit H2
8.12404 Ahg489877 light harvesting complex of photosystem II 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression