Detail



ID : Ahg951584

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951584|scaffold_803471.1
Sequence
ACTCAAAACC ATCTGTGGCC ATGGCAGCCT CTCTCCAATC CACCGCCACA TTCCTCCAGT CGGCGAAGAT CGCCACCGCT CCTTCTCGCG GCAGTGCTCA CCTCCGGTCT ACTCAATCCG TCGGCAAATC TTTCGGGCTA GATACTTCCT CTGCTCGCCT CACTTGCTCC TTCCAATCTG ACTTCAAGGA CTTCGCCGGT AAATGCTCCG ACGCTGTCAA AATCGCTGGA TTCGCTCTTG CCACCTCTGC TCTCGTCGTC TCGGGAGCAA GTGCAGAGGG AGCTCCAAAG AGACTGACCT ACGATGAGAT TCAGAGCAAG ACATACATGG AAGTGAAAGG AACTGGAACG GCTAACCAGT GCCCAACTAT TGACGGTGGC TCTGAGACAT TCTCGTTCAA GCCCGGAAAG TACGCAGGCA AGAAGTTCTG CTTCGAGCCT ACTTCCTTCA CCGTCAAGGC AGACAGTGTA AGCAAGAACG CGCCTCCTGA GTTCCAGAAC ACCAAGCTCA TGACCCGTCT CACCTACACC CTTGACGAGA TCGAAGGACC CTTTGAGGTT GCTTCAGACG GAAGCGTCAA TTTCAAGGAA GAAGATGGAA TCGACTACGC TGCAGTCACA GTCCAGCTTC CAGGAGGTGA GCGTGTGCCA TTCCTCTTTA CAGTCAAACA GCTTGACGCC TCAGGCAAAC CAGATAGCTT CACCGGAAAA TTCTTGGTTC CATCGTACCG TGGCTCTTCC TTCTTGGACC CAAAGGGTCG TGGTGGATCC ACAGGATATG ACAACGCCGT GGCATTGCCA GCTGGAGGCA GAGGAGACGA GGAGGAGCTT GTAAAGGAGA ATGTGAAGAA CACGGCAGCT TCGGTGGGAG AGATCACTCT GAAAGTGACA AAGAGCAAGC CGGAGACAGG AGAGGTGATC GGAGTGTTCG AGAGTCTTCA GCCGTCAGAT ACTGACTTGG GTGCTAAGGT ACCAAAGGAT GTGAAGATCC AAGGGGTGTG GTATGGTCAA CTTGAGTGAT CATGTTATTA TATTTCTGTT GATTGTGTTT GATGATAATG ACAACATCTT TTGATGCTTT CTTCGTTTAT CTCTCTTATA AAAAATGCAC ATGCCTAAGA T 
Length1121
Protein Sequence
Protein Residue
Map Locationscaffold_8: 21345377.. 21346871
Download Sequence
A.thaliana
AGI-codeAT5G66570.1
DescriptionPS II oxygen-evolving complex 1
TAIR curator summaryEncodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO1 is the major isoform in the wild-type.
Alias[MSP-1][OE33][OEE1][OEE33][PSBO-1][PSBO1][MANGANESE-STABILIZING PROTEIN 1][OXYGEN EVOLVING COMPLEX 33 KILODALTON PROTEIN][33 KDA OXYGEN EVOLVING POLYPEPTIDE 1][OXYGEN EVOLVING ENHANCER PROTEIN 33][PS II OXYGEN-EVOLVING COMPLEX 1][PS II oxygen-evolving complex 1]
Gene coexpression
MR
MR Locus Description
1 Ahg915184 photosystem I subunit l
1.73205 Ahg470689 photosystem II subunit P-1
2 Ahg475174 photosystem I light harvesting complex gene 3
2.82843 Ahg489877 light harvesting complex of photosystem II 5
3.4641 Ahg473640 photosystem I subunit F
3.74166 Ahg480223 photosystem II subunit X
3.87298 Ahg486922 light harvesting complex photosystem II
4.47214 Ahg494366 Glucose-6-phosphate/phosphate translocator-related
4.69042 Ahg943629
6 Ahg475878 photosystem II BY
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression