Detail



ID : Ahg490395

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490395|fgenesh2_kg.6__3529__AT4G01840.1
Sequence
CTTTTCTTTT GGATTTTTCC GTTTGTCCCC ATAAAAAATT TCATTTTTAT TAAGTTTTTA GAGATTCCTC ATTTGTTGGT AAATGGAGAA TCACCAACCT CTCATCAGCC CTCAATCACG TTTCCGCCTC CAACCAATAC CGGAAAATCC AGACTCCTCC TCCTCCGCCG CCATAACAAT CCCTCGCTCA ATCTCAAACA CTTCCTTCTT CCACGAAATC TCCCAAGAAC GTCTTCTCCA TCATCAAGAC CTCGAAGAAT CCGTACAAGA CGACAACGAC GAAGACTCAG ACTCAGACGA AACAAATCGG TTTTTGTCAA ACACTAGACC ACTTCACCGA TCTCGTACAG CTCCAGCTAT GGTAATCATC AAAGACTTAA GACCCAAAAA TCAAGAAACC AAAAAACCAT CACCAATCTC AAAATCCATA ATCAAACAAG CTATTTTCTT GCTAGTCATC TACTTAACCT TAGGGGTTTC AATCTATTCA TTCAATCGTG ACCACTACTC AGGAATCGAA ACCCATCCTG TAGTCGACGC TCTCTATTTC TGTATCGTCA CTATGTGTAC TATTGGTTAC GGTGACATCG CTCCGTTGAC TCCATGGACC AAGATCTTCG CCGTTGTTTT CGTTTTATTC GGGTTCGGGT TCTTGGATAT CTTACTAAGT GGTGTCGTTA ATTACGTCTT GGATCTTCAA GAGAGTATGA TTCTCACCGG AATCCAAACG AAGCAGCACC ATCACCACCA CCATCGATTC TCTGCTAAAG ATTACATAAT TGATTTTGAG AAAGGGAGGA TGAGGATAAG GATGAAAGTT GGTTTAGCGT TATGCGTCGT CGTTTTGTGT ATTGGTGTTG GTGCTTTGGT TTTGCATTTT GTTGAAGAAT TGGGTTTTGT TGATTCGGTT TATTTGTCGG TTATGTCTGT GACTACCGTT GGTTATGGTG ATCGAGCTTT TAAAACGCTT CAAGGGAGGC TTTTTGCGGC GGTTTGGCTT CTTGTTTCCA CTCTTGCGGT GGCGCGTGCG TTTTTGTATT TGGCGGAAGC GAGGATTGAT CGCCGGCATC GGAAAGCTGT TAAATTGGCG TTGAATAGAG AAATCACTGT TGAGGATTTG CTCAAAGCTG ATACTTATCA TCATGGTTTC ATCAGTAAAT CAGAGTATAT AGTGTTCAAG CTTAAGGAAA TGGGGAAGAT CACTGAGAAA GACATTAACC AAGTTGGGAT GCAGTTCGAG AAACTTGATC CTAATAATTT AGGAAAAATC ACATTACCTG ATCTTTTGGG TGGTCCTTTG TGACAAAAGA ACATTCTCCT CTGTCTCTGC TTTTTACTTT CTTTTTTTCT TTTTTCAAGA AAAATAACTG AATATATGTA GCAGCAGTGA TTCATACAAA GAATTATC 
Length1408
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22601202.. 22602877
Download Sequence
A.thaliana
AGI-codeAT4G01840.1
DescriptionCa2+ activated outward rectifying K+ channel 5
TAIR curator summaryEncodes AtTPK5, a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK5 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo.
Alias[ATKCO5][ATTPK5][KCO5][TPK5][Ca2+ activated outward rectifying K+ channel 5]
Gene coexpression
MR
MR Locus Description
9.8995 Ahg474412 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
21.2132 Ahg478095 CONSTANS-like 9
22.7156 Ahg887643 Disease resistance protein (TIR-NBS-LRR class)
22.8473 Ahg933859 beta galactosidase 9
23.4947 Ahg939605 expansin A9
23.8118 Ahg938899 magnesium transporter 6
24 Ahg479059 lectin protein kinase family protein
25.0998 Ahg489182 DNAJ heat shock N-terminal domain-containing protein
25.4165 Ahg919849 associated molecule with the SH3 domain of STAM 2
25.6125 Ahg490295 bZIP transcription factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression