Detail



ID : Ahg887643

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887643|Al_scaffold_0020_3
Sequence
ATGGATTCTT CTTGTTTCTT CCTTACCATT ATTGCTGCTG CAATAGGATT CTTCTTGCTT TTTAGAAAAC TCAGATTCCA TCAAGAAGAT AACAAAGAAA AGAACTCTTC TTCTTCTTCT TCATCAACAC CATCTTCTTT AGCTCCTTCA TCACCACCAC CATCGTCTTT GGATCCCATC TGGACACACC ATGTGTTTCC AAGTTTTCGA GGGGAAGATG TCCGTAGAGA CTTTCTTAGT CACATTCAGA TGGAGTTTCA AAGAATGGGA ATCACACCAT TCATTGATAA TGAGATCGAG AGAGGACAAT CCATCGGTCC CGAACTCATT AGAGCAATTA GAGAATCCAA GATCGCAATT ATCTTGCTCT CAAGAAACTA CGCTTCTTCG AGTTGGTGTC TTGACGAATT GGCGGAGATT ATGAAGTGCA GGGAAGAATT GGGTCAAACA GTGTTGGCTG TTTTCTATAA AGTGGATCCA TCTGATGTAA ATAAGCTGAC CGGAGATTTT GGAAAAGTCT TCAAAAAAAC ATGTGCCGGT AAAACAAAAG AGCACGTTGG GAGATGGAGA CAAGCTTTGG CAAATGTCGC CACAATCGCC GGTTACCATT CGACCAACTG GGATAATGAA GCGACCATGA TTAGAAATAT CGCTACTGAT ATATCCAACA AGTTGAATAA TTCTGCCTCA TCAAGTGATT TTGATGGGTT GGTTGGGATG ACTGCTCATT TGAAGAAGAT GGAACCATTG TTATGCCTAG GCTCAGATGA AGTGAGGATG ATTGGGATTT GGGGTCCTTC TGGGATTGGA AAGACGACCA TCGCCAGAGT TGTATACAAC AAACTCTCCA ACAGTTTCCA ACTGAGTGTC TTTATGGAAT CTATCGAAGC AAAATATACA AGACCATGTT CCGATGACTA TAGTGCCAAG TTGCAGTTAC AACAGCAGTT TATGTCTCAA ATAACCAACC AGAGTGATAT GAAGATTTCT CATTTAGGCT CGTATTTTCG AGGAATGTCT AAGCTGGAGT GGACGAAAGC ACTACCAAGG TTAAGGAGTA GCCTTGACGC TGATATTCTT AGCATTTTGA AGTTCAGCTA TGATGCCTTA GATGACGAAG ACAAATATTT GTTTCTTCAT ATAGCTTGCT TCTTCAATCG TGAATGGATT GTGAAAGTGG AAGAGTATCT TGCAGAGACG TTCTTGGATG TGAGTCATCG GCTTAATGGC TTAGCTGAAA AATCGCTCAT ATCTTTGAAT GGGGGATATA TAAACATGCA TGATCTGCTA GTCAAACTAG GTATAGACAT TGTCCGTAAA CAGTCTCTTC GTGAGCCTGG ACAACGACTA TTTTTGGTTG ATGCACGAGA AATTTGTGAA GTACTCAATC TTGATGCGAA TGGCAGTAGA AGTGTTATGG GCATAAATTT CAACTTTGGT GAGGATAGGA TCAAGGAAAA GTTACATATA AGTGAGAGAG CCTTTCAAGG AATGTCTAAT CTCCAATTCT TAAGAGTCAA AGGGAATAAC AATACAATAC ATCTACCGCA CGGTTTAGAG TATATATCTC GTAAACTTCG ATTACTACAA TGGACTTATT TTCCGATGAC ATGTTTGCCT CCTATTTTCA ACACGGAGTT TCTGGTTGAA CTAGACATGC CTTACAGCAA ACTTGAGAAG TTGTGGGAAG GAATTAAACT CCCTTCCTCT ATTGGGAATG CCACTAATCT CGAGTTATTA GATCTCGGTG GATGCTCAAG TCTGGTGGAG CTCCCTTCCT CTATTGGGAA TCTCATCAAT CTAAAAGAAT TGCATCTTAG CAGTTTATCA AGTCTGGTGG AGCTCCCTTC CTCTATTGGG AATCTCATCA ATCTAAAAGA ATTGGATCTT AGCAGTTTAT CATGTCTAGT GGAGCTCCCT TTCTGGATTG GAAATGCCAC CAACCTTGAG GTTTTAAACC TTGACCAATG CTCAAGTCTG GTAAAGCTCC CCTTTTCTAT TGGAAACCTT CAGAAGTTGC AAACTTTGAC CTTACGAGGA TGCTCTAAGC TAGAAGATCT TCCAGCCAAC ATCAAATTGG GATCTCTCGG CGAACTTGAT CTCACTGATT GCTTGCTGTT GAAAAGGTTT CCTTTATCAA TCAAATCATG GTCTCGTCTC AATGAGGTGG ATATGTCATA CACTGAAAAT CTCAAGAACT TTCCTCATGC TTTTGACATC ATCACAGGCC TGCACATGAC CAATACAGAA ATACAAGAGG TTCCCCCATG GATCAAGAAA TTCTCTCGTT TAACAGTACT CATACTCAAG GGATGCAAAA AGTTGGTATC ACTCCCACAG ATTCCAGATT CCATCTCTTA CATAGATGCA AAAGATTGTG AGTCCCTGGA GAGACTAGAT TGCTCCTTTC ACAATCCAAA GATTTGGCTC AGATTTGCTA AGTGCTTCAA ACTGAATCAA GAAGCCAGAG ACCTCATCAT CCAGACACCA ACTAGTAGAT CTGCGGTCTT ACCCGGCAGA GAAGTGCCTG CATACTTCAC TCACCAATCT ACTACTGGAG GTTCCTTGAC AATCAAGCTG AACGAGAAGC CTCTTCCTAC ATCCATGCGG TTTAAGGCTT GCATTTTGCT GGTTCATAAA GGTGACAATG AGGCTCGTGA TGATAAAAAC TGGATGGATG AAAATTGCTA CATTGTTAGT TGTAAAAAAA GTAAGCATTA TTTATATCCA GTTTTAGCAG AGCATGTGTA CGTATTTGAA GTCGAAGCAG ATGTGACTTC CAGCGGGCTT GTCTTTGAGT TCAAGATCAG GAGTAAGAAT TGGAAGATAA AAGAATGTGG GGTATTCCAA CTCTCGGAGG TTCCTTGA 
Length2868
Protein Sequence
Protein Residue
Map Locationscaffold_20: 36334.. 40077
Download Sequence
A.thaliana
AGI-codeAT5G11250.1
DescriptionDisease resistance protein (TIR-NBS-LRR class)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
22.7156 Ahg490395 Ca2+ activated outward rectifying K+ channel 5
24.2487 Ahg939865 Enhancer of polycomb-like transcription factor protein
62.7535 Ahg925915 Protein kinase superfamily protein
76.4984 Ahg887641 Disease resistance protein (TIR-NBS-LRR class)
78.5748 Ahg913285 ARM repeat superfamily protein
79.1518 Ahg907315 S-locus lectin protein kinase family protein
82.9216 Ahg473585 lectin protein kinase family protein
89.3532 Ahg889845 cysteine-rich RLK (RECEPTOR-like protein kinase) 16
92.2497 Ahg895523 cysteine-rich RLK (RECEPTOR-like protein kinase) 39
98.9596 Ahg898727 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression