Detail



ID : Ahg939605

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939605|scaffold_600149.1
Sequence
TTTTTCCGTA CTTAAGCAAA CAAATGGCGG CGAGAGTAAT AACATTAATG GCGGTTATGG TGGTTACTGC CTTGACGGTG AACGCCAAAA TCCCCGGAGT TTACACCGGT GGTCCCTGGA TCAATGCTCA CGCCACCTTC TACGGCGAGG CTGACGCTTC CGGCACTATG GGTGGTGCGT GTGGGTACGG GAATTTGTAT AGCCAAGGTT ACGGTGTGAA CACAGCGGCT TTAAGCACTG CCTTATTCAA CAATGGTTTA AGTTGTGGCT CTTGCTATGA GCTCAAGTGT GTCAATGATC CTGGATGGTG TCTTCCCGGA AACCCATCAA TCCTTATCAC CGCCACTAAT TTCTGCCCTC CCAACTTTAA TCAAGCTAGC GATGATGGTG GTTGGTGTAA CCCTCCTCGT GAGCACTTTG ATCTCGCCAT GCCTATGTTT CTATCCATCG CTAAGTATAA GGCCGGTATC GTCCCCGTCT CTTACCGCAG GATCCCATGT AGGAAGAAGG GAGGTATAAG ATTCACAATC AATGGATTCA GGTACTTCAA CTTGGTGCTG GTCACTAACG TAGCCGGAGC TGGCGACGTC ATTAAGGTGA GTGTGAAAGG AACCAACACA CAATGGTTAG ATCTGAGCCG GAACTGGGGA CAAAACTGGC AATCCAACGC AGTTCTTATC GGCCAATCTC TTTCTTTCCG AGTCAAAACC TCCGATGGCC GAAGCTCCAC CTCCAACAAC ATTGCTCCCA GTAACTGGCA ATTTGGTCAG ACTTACTCCG GCAAGAATTT CCGCGTTTGA TTCCTAGAAA ACGAAAAAGA 
Length820
Protein Sequence
Protein Residue
Map Locationscaffold_6: 550412.. 552327
Download Sequence
A.thaliana
AGI-codeAT5G02260.1
Descriptionexpansin A9
TAIR curator summarymember of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias[ATEXP9][ATEXPA9][ATHEXP ALPHA 1.10][EXP9][EXPA9][expansin A9]
Gene coexpression
MR
MR Locus Description
8.3666 Ahg493510 Rapid alkalinization factor (RALF) family protein
9.27362 Ahg313345 ureide permease 5
9.32738 Ahg474913
9.69536 Ahg490488 TRAF-like family protein
13.4907 Ahg478095 CONSTANS-like 9
14.9666 Ahg486064 copper chaperone
21.2132 Ahg929332 metallothionein 3
21.7256 Ahg321672 DA1-related protein 2
22.0454 Ahg895882 TRAF-like family protein
23.2164 Ahg475583 ATPase, F0 complex, subunit B/B', bacterial/chloroplast
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression