Detail



ID : Ahg490470

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490470|fgenesh2_kg.6__3604__AT4G00990.1
Sequence
TTTGTCTCCG AGTATGGAGA AAAGGAAAGG GAAGCGAATC AGACGAGGAG ATTCCGACGA GTTATTCGAA GATGGGGGAT CTCAAAACGG GCGTAAGGCG AGGAAGAAAG AGAATGATCT TGTGAGCAGA GGACGAATCG GAAGAGGAAG AGGAAGAAGA AAATTTGATG GCGGAGAGGT TTCTAAGCGA TCTATTGAAA TCGACATGTC TAATCCCGAG AAGGATATTA AGTCTGATGG AAGCAGAAAG TATGTGGGTT TGACGTGTCA TCATTGTAAG AACTTGACGA GTGAGAGTGA TCTTATCTTC TGTTCAAAAT GTAACAAGAA GTATTGCAAT GAGTGTATCA AGAGATGGTA TTCAGAAAGA ACAATAGAGG AAGTTCGAGC TGCTTGTCCA TTCTGTATGA AGAATTGCAA TTGCAGAGGT TGTTTGCGGT TGCCTTTGGT TGTCAAGCCT CGAAGTGAAA AAGAAACAAA TGTCAAGTTT AAGCAGTTGC AGTACCTATT AGTTAAAGTT CTCCCAGTTC TTAAGGATAT TTATATGGAG CAGAACCGTG AACTTGAGAT TGAAGCAACT ATTAGAGGAC TCCCTGTGAC AGAAGCTAAT ATTAATAGGT GCAAACTTGA CCCAAGTGAA CGCATATACT GTGATCTCTG CCGAACATCC ATTGCCAATT TTTACAGAAG CTGTCCGAAC CCAGATTGTT CAGTCGATAT ATGTCTTTCT TGTTGCAAGG AACTAAGTGA GGGATTCCAT CAAGAGAGAG ATGGGAAGAA AAATGCAGAA GGGAAAGGAT ATGAATGGCG AATCCAAGCA GGTCAAGGAA AAGATTCGGA AGCCTATGTT CCACTGCATT TCTCTACTTG GAAGATTAAA TCAGACAGTA GCATTCCATG CCCTCCAAAA GAGTGTGGTG GTTGTGGTAC TTCAACACTG GAGTTGAGAC GCTTATGGAA AAAAGATTGG GTTGAAAAAT TAATAACGAA TGCCGAGGAA TGTACTCTGC ATTTTAGGCC ATCAGATGTG GATATTGCTC ATGAATGTTC CTCATGCACT ACCAATTCTG ATTCCATTAG AAGGCAGGCA GCATTTAGGA AGAATGCTCA TGATAATTTC TTGTACTCCC CAAATGCTGT TGATCTGGCT GAAGACGATA TTGCTCATTT TCAGTCGCAT TGGATGAGGG CAGAACCTGT TATAGTTAGA AATGTTCTCG AGAAGACGTC TGGACTAAGT TGGGAACCAA TGGTTATGTG GAGGGCTTGT AGGGAAATGG ATCCAAAGCT TAAATGTAAA GAAGAAGAGA CGAAAAAAGT CAAAGCTTTG GATTGCTTGG ACTGGTGTGA GGTTGAAATA AATATTCATC AGTTTTTTGA CGGCTACTTA GAAGGCCGCA TGCATAAAAA CGGTTGGCCA GAAATGTTGA AATTGAAGGA TTGGCCTCCA TCAACTTTAT TTGAAAAGCG CCTTCCAAGG CATAATGCTG AGTTTATTGC TGCACTGCCT TTCTTTGATT ACACTGATCC AAAGTCTGGT ATCCTAAATC TCGCAACAAG ACTTCCAGAA AAATCCTTGA AGCCAGATCT TGGACCCAAG ACATACATTG CGTACGGTTT CCATGAAGAG CTTAATAGAG GAGATTCGGT GACAAAACTA CATTGTGATA TTTCTGACGC GGTCAATGTG TTGACACACA CAGCTAAAGT GGAAATCCCT CCCGCCAAAT ACCAAAACAT AAAAGTACAT CAGAAAAATA ATGCAGAAGC CATGTTGCAG AAACAGCAAT ACAGTGGTCA AGTGACAGAA GCCAGCGAAC TTGAAAATAA GTCACTGAAA GAAGTGGATG ATGATAAACA GGATTTAAAG GACAAGGCAG CTAACGAAGA ACAGTCAAAT AACAGTTCAA GACCGGGCTC ACAAGAAGTT GAGAAAGTAA ATATTTCAAA AGAGGATAAT CCCACACAAC CTGCTGTGAG TATAATTGTG GAATCCATAC AAGAGCAGAA GCTGGATGTT CAAAAGAAAA CAGATGGCAA TACCAATGAG AGGTCAAAGG CTGTGCACGG TGGTGCTGTC TGGGATATCT TTCGAAGAGA GGATGTTCCA AAACTTATTC AGTTTTTGAA AAGGCACAAG CATGAGTTTC GTCACATCAA TAACGAACCC GTGAAATCTG TTGTTCACCC AATTCATGAC CAGACTATGT TCTTGTGTGA AAGTCAGAAG CAACAGCTGA AGGAGGAATT TGATATAGAA CCATGGACCT TTGAGCAACA CCTCGGCGAA GCTGTTTTCA TACCTGCAGG GTGTCCTCAC CAAGTGAGGA ATAGACAGTC TTGCATAAAG GTGGCACTAG ACTTTGTGGC TCCTGAAAGC GTTGAAGAAT GCCTTAGGCT AACACAGGAG TTCCGTAGAT TACCGAAAGA CCACAGATCT AGCGAAGATA AATTGGAGCT TAAGAAAATA GCGCTTTATG CTGCGAGCTC AGCCATAAGA GAGGTAAAGG AGCTAATGCA AAACTCCACG ACGCAGTGAT GCCTAACAAA TGACAAG 
Length2557
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23024741.. 23030375
Download Sequence
A.thaliana
AGI-codeAT4G00990.1
DescriptionTranscription factor jumonji (jmjC) domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg474152 Alanyl-tRNA synthetase
2 Ahg913701 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
3.74166 Ahg496298 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
5.91608 Ahg907675
19.799 Ahg892285
20.9284 Ahg342948
22.5167 Ahg343150
29.4618 Ahg470549 chromatin remodeling 31
36.7696 Ahg887462 Protein of unknown function DUF2359, transmembrane
41.7612 Ahg347293
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression