Detail



ID : Ahg490565

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490565|fgenesh2_kg.6__3699__AT4G01710.1
Sequence
CGAATGGCAG AATTCGTTGA GGCTGATAAT GCAGAAGCAA TAATCGCGAG GATCGAAACC AAATCGCGGA AGATTGAAAG CTTACTCAAA CAGTACAAAC ATGTCGAAGC TTTGAAAACG GCTCTTGAAG GTTCGCCTCC GAAAACTCGC GATGAACGTT GCAAGTCGGC TAATTGGATA GTTGTGCACA GAGCTATAAT GGCCATAAAG GATATTGACG GAATGCTCAA TGCTCTTGAT GCCGAATATT ACGACATTCT CATGAAGTAC TTGTACAGAG GCCTTTCTAC TGGCGACCGA CCCACCTGCG ATCAGTGCTT GAAGATTCAT GAGAAACTCA CAGAGAGAGC TGGTCTCGGT TGCATTCTCC GCTGTCTTAC TGATACCATA AACACCGTTT GATCCATGAT TGCCTCTAAT GTATATTCTC CTTGAGAAAC CATGTCTCAC ATTTATCAGT TTAGACTTGT TTTTCAATTA GCAAACAGTT GCTTGATAA 
Length499
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23490837.. 23491771
Download Sequence
A.thaliana
AGI-codeAT4G01710.1
DescriptionARP2/3 complex 16 kDa subunit (p16-Arc)
TAIR curator summarybelongs to the DIS(distorted) gene family. Encodes a actin polymerization factor. Involved in cell expansion of trichome.
Alias[ARPC5][CRK][CROOKED]
Gene coexpression
MR
MR Locus Description
20.3961 Ahg470078 SEC7-like guanine nucleotide exchange family protein
21.166 Ahg496955 gamma carbonic anhydrase 3
34.2929 Ahg928125 Metallopeptidase M24 family protein
39.5727 Ahg488271 Pentatricopeptide repeat (PPR-like) superfamily protein
43.2666 Ahg902176
48.9285 Ahg471620 NADH dehydrogenase (ubiquinone)s
49.5984 Ahg336448
49.8397 Ahg485217 nuclear factor Y, subunit C1
50.1996 Ahg476749 PAM domain (PCI/PINT associated module) protein
57.55 Ahg479081 AAA-type ATPase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression