Detail



ID : Ahg490646

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490646|fgenesh2_kg.7__79__AT4G38810.2
Sequence
CACATATAAA GAACAAGCAA GTCCGAACCA ATCTAGAACA ACACACACAC ACACTTGGAG TTAGAGGAAA AATTTGGGGT GTGTCAAGTT TCTGTTTTTC CTTTTCTCGT GCTTCCATCA CGAGATCTCT CACAAGGCTC CCGCGACTCA AGAAAGATAA AGAGAAAGAA AGAAGATTCC ATAAATGGAC ATGAAAAGCA ACAACCACCA GCAACAGCAA CAAGTACTTG ATGGCTCGGA CATAGTTGAG CTGGTGGAAA ACGAGAAAGT GTTCGACAAG TTTGTGGAAC AAAAGTTTCA ACAGTTAGAC CAAGATGAAG ATGGTAAGCT CTCCGTGACT GAGTTACAAC CCGCCGTTGC TGATATCGGC GCCGCTCTTG GTTTGCCTGC TCAAGGCACT TCTCCTGATT CTGATCACAT CTACTCCGAG GTTCTAAACG AATTCACTCA TGGGAGTCAA GAGAAAGTGA GCAAGACAGA GTTTAAAGAA GTGTTGTCGG ACATTTTGCT GGGTATGGCT GCTGGTCTGA AACGTGATCC TATCGTCATC CTCAGGATGG ACGGTGAGGA TCTCTCGGAG TTTGTCCACG GCCCTGGATA CGAAATCGAA CTTGTTTCTG TCTTCTCAGA GCTCTCCAGT TGCGAGGACG CATCGCTCCG TGATTGTATC GTCAAAGCTC TCCAGTCTCT TTCTGTTGAT CATGGAATGC CTCCTTCCAA CGACCCATGG GTGATGAGCA ACATTGTAGA ACCAATTGTT GACTCTTGTC TTGATGAAGA AGATAAGAGA GAGAAGAGCG CGTCTCAGGA GAAATTCTTG GAGGCATTCA AGAGAGTCGT GGAGAGAGTG GCTCAGCGTC TCAATGAACA ACCCGTGATC GTTGCTCACA GCGAAAATAC TTTCGATGGG AGCGGTGTCA GGAGGCTCTT GTCCAATAAA TTCGAATTCG ATAAGGCACT AAACGTTGCA TTGGAGACGA TTCCAAAAGA CCGTCATGGT AAGGTGTCTA AAGAATATCT ACGAGCTGTG CTTGACACTG TTGCACCATC TGCGACTTTA CCACCGATAG GCGCTGTGTC CCAGATGGAT AATATGATAA TGGAAGCGTT GAAGATGGTG AATGGAGATG ATGGAAATAT GGTGAATGAA GAAGAGTTTA AGAAAACAAT GGCAGAGATA TTGGGGAGTA TAATGTTGCA GCTTGAGGGT AATCCGATAT CGGTTTCCTC TAACTCGGTG GTTCACGAGC CGCTCACCTC GGCTACATTT CTGCAGCCGA CTTTGAATGA AACAGAGGAG CCTTCAACCT AATCATAGAC GGGAATGTTA TATGGTTTCA GAGTTTTTTA CCCCCAAAAG TTTTAGAGTA ATGAGGAAAA CCGTCTTACT TTGCAGATGT ATAATATTGA AAGTTTGGGG TTTCCTCTTG TGGGTGTGGT GATTATACTC ACGCTTTTTC TTTTCTTTTT CTAATTACCA AGGGATGCAA TGTTTACTGT GTTTTTATTT CGTTATAAAT TGTTTACGTT TATGAAACAT TTGAGTTATC TTTAAAAGTG GGAAATAAAA ATTGTGAAGT TAA 
Length1583
Protein Sequence
Protein Residue
Map Locationscaffold_7: 236055.. 239222
Download Sequence
A.thaliana
AGI-codeAT4G38810.2
DescriptionCalcium-binding EF-hand family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.31662 Ahg495876 Fatty acid hydroxylase superfamily
4.79583 Ahg482707 plasma membrane intrinsic protein 2
12.6491 Ahg493143 tonoplast intrinsic protein 2;2
14.7309 Ahg471229 Phosphatidylinositol-4-phosphate 5-kinase family protein
15.748 Ahg489979 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
16.2481 Ahg475988 alpha/beta-Hydrolases superfamily protein
18 Ahg919563 vacuolar protein sorting 41
19.5959 Ahg943195 fibrillin
20.6882 Ahg496002 Undecaprenyl pyrophosphate synthetase family protein
21.6564 Ahg488004 alpha/beta-Hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression