| Annotation |
|---|
| Description | jgi|Araly1|490975|fgenesh2_kg.7__408__AT4G36630.1 |
| Sequence |
TCGACGATAT GGTTCACAAC GCTTATGATT CGTTTCAGCT TCTCAAAGAT TGTCCCGCTA GGATCGATGC TGTTGAATCC TACGGCTCCA AGCTCTTCGC CGGATGCTAT GACGGTTCTC TCCGCATTTA CTCTCCACCG GAATCTTCTG CCTCCGATCC GTCGGAGCTG CATCAAGAGA CTTACGTGCT TGAGACGACC GTGGCTGGAT TCTCTAAGAA ACCGATTGTG GCGATGGAGG TTTTGGCTTC AAGAGAGTTG CTTTTGTCTC TCTCTGAGTC AATTGCGTTT CATGGACTTC CTAATTTGGA GACTGTTGCT GTGATTACTA AAGCTAAAGG CGCTAATGCT TATTCGTGGG ATGATCGGCG TGGGTTCTTG TGTTTCTCTA GGCAAAAGAG GGTTTGTGTT TTCAAGCACG ATGGAGGAGG TGGATTTGTA GAGGTCAGAG ACTATGGAGT TCCTGATACT GTCAAGTCGA TTTCTTGGTG TGGAGAAAAC ATCTGTTTAG GCATTAAAAA AGAGTATCTG ATACTTAACA CTGCTAATGG GACACTCTCT GAGGTTTTTC CTTCTGGTAG GGTTGCTCCT CCTCTCGTGA TATCTCTACC TTCTGGTGAA CTTCTTTTGG GAAAGGAGAA CATTGGAGTT TTTGTTGATC AAAATGGGAA GCTCCTTCAA ACAGAGAGAA TTTGTTGGTC AGAGGCCCCA ACGTCTATTG TCATTCAAAA CCCTTATGCA ATAGCCTTGT TGCCTCGTCG AGTTGAGGTT CGCTTGCTCC GAAGTCCATA TCCTTTAATA CAGACAATTG TTCTTCAAAA CATTCGTCGC CTGGTCAAGA GCAACAATGC TGTGATTGTT GGTTTGGATA ACTCTGTTTA TGTTCTCTTC CCTGTCTCTA TTGGTGCCCA GATTGTGCAA TTAACAGCTT CGGGAAATTT TGAGGAAGCC TTAGCTCTAT GCAAAGTACT CCCCCCTGAA GAGTCAAGCC TACGAGCTGC GAAAGAGAGT TCGATTCATA CAAGATTTGC TCATTATCTT TTTGAGAACG GGAGCTATGA GGAAGCCATG GAACACTTCC TCGCATCTCA AGTAGATATC ACGCATGTAC TTTCCATGTA TCCCTCCATC ATTCTTCCTA AAACAACTAT TATTCCTCAA CCAGATAAGA TGGTGGACAT GTCTGGTGAT GAAGCATCTC TGTCAAGAGG TTCATCTGGC ATTTCAGATG ATATGGAGTC TTCATCTCCT CGATATTTTT TGGAACCTGA GGACAATACA GCCCTTGAAT CTAAGAAAAT GAGTCACAAC ACTTTGATGG CTCTTATAAA GTACTTGCAG AAGAGGAGGC CGGCTGTTAT CGAGAAGGCC ACTTCTGAAG GAACAGAAGA GGTCATTTCG GATGCTGTTG GTAAAACTTA TGGGGCATAT GATTCATCTA AGTCTAAGAA GTCCAGCAAG GGACGTGGTA TGATCCCTCT TAATTCAGGT GCCAGAGAGA TGGCAGCAAT CCTTGATACA GCTCTTCTCC AAGCACTTCT ACACACTGGC CAGTCTGGAG CTGCTATAGA GTTATTAAAG GGTGTCAACT ACTGTGACGT TAAGATTTGT GAGGAGATTC TCATGAAAAG TAAAAATTAT TCTGCACTAT TAGAACTATT CAAGAGCAAT TCGATGCACC ATGAAGCCCT TAAGCTTCTT AATCAGCTGG CTGAGGAGTC CAAATCAGAC CAGTCACAAA CTGAAGTTAC ACAGATATTT AGTCCTGAGT TGATCATTGA ATATCTCAAG CCTCTCTGCA GGACTGATCC TATGCTTGTC TTGGAGTACT CTATGCTTGT CCTGGAAAGC TGTCCAACTC AAACCATCGA CTTGTTTTTG TCTGGAAATA TCTCAGCTGA CCTTGTCAAT TCGTATCTGA AGCAGCATGC TCCAAATATG CAGGGTAGAT ATTTAGAACT TATGATGGCT ATGAATGAAA CCGCAGTTTC TGGAAATCTC CAAAACGAGA TGGTACAAAT CTACCTTTCA GAAGTGCTTG ACTTGTATGC TGCAAAGAGT GCCCAGCAGA AATGGGATGA GAAGGATCAT CCTCCCGAAA GGAAAAAACT ATTGTCTGCG TTAGAGAGCA TCTCCGGATA CAGTCCACAG CCTTTGTTGA AGCGTCTTCC ACGTGATGCT CTCTATGAAG AGCGTGCAGT TATATTGGGC AAAATGAATC AACATGAGCT TGCTTTGTCG ATCTATGTTC ATAAGCTTCA TGCACCTGAT CTGGCGTTGG CTTACTGTGA TCGTATATAT GAGTCCGTTT CTTATCTACC ATCTGGAAAA CCGTCAAGCA ATATCTACCT CACAGTGCTA CAAATATACC TGAACCCTAA GAAAAGCGCA AAAGACTTTG CAAAACGAAT TGTAGCTCTA GGATCATTCG AAAGTTCAGA GACTACAAAG ATGATGGACT CTGTTTTATC TTCAAAAGCT AAAGGAGGCC GATCCAAGAA AATTGTTGCA ATAGAAGGTG CTGAGGATAT GCGAGTTGGT CTCAGTAGCA GCACTGACAG TGGAAGAAGC GATGTTGATA CTGAAGAACC CTTGGAAGAA GGAGACTCCA CCGTTATGAT CTCTGAAGTT CTTGATCTGT TGAGCCAAAG GTGGGAGAGG ATCAACGGTG CACAAGCCCT CAAGCTTTTA CCTAGAGAAA CTAAACTTCA GAACCTACTT CCATTTCTTG CACCCCTTCT AAGAAATTCA AGTGAAGCAC ACAGGAACTT TTCAGTCATC AAGAGTTTGA GGCAGAGTGA AAACTTACAG GTGAAAGAGG AACTGTACAA ACATAGGAAA GGAGTAGCGC AAGTAACAAG CGATAGCATG TGCTCATTGT GCAACAAGAA GATCGGGACA AGCGTCTTTG CTGTTTATCC CAACGGGAAA ACGTTAGTTC ACTTTGTCTG CTTCAGAGAT TCTCAAGGCA TGAAAGCTGT TTCTAAGACA TCACATGGAA GAAGACGATG AGAGGTCATC ATCATCATTA CTGTAACAAA GAGGTTTAAG ACACTAAACC ATCTTTTCTT TTTACAAAAC TCCCAAAGTG CAATTAAAGA AAAAGCTCCT TTCGTTGTTT GTCTGTTTAT AGAGAGATAG TTGGAGCTAA ATTTTTTGGT TGTGTTTTCT TCTTTGTTTT CTTTTGTTTG TTTGGTTGAA AATGATGGTC TTGACAAAAC CAGTTTGATT CTTGTTGTAA AATCTGTT |
| Length | 3248 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 1638675.. 1643441 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G36630.1 |
| Description | Vacuolar sorting protein 39 |
| TAIR curator summary | |
| Alias | [EMB2754][EMBRYO DEFECTIVE 2754] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.583 |
Ahg486992 | Fes1C |
| 10.9545 |
Ahg903335 | Transport protein particle (TRAPP) component |
| 11.9583 |
Ahg488148 | ARF GTPase-activating protein |
| 16.0624 |
Ahg485239 | |
| 16.0624 |
Ahg478500 | LETM1-like protein |
| 16.7332 |
Ahg912305 | disease resistance protein (TIR-NBS-LRR class), putative |
| 21.0713 |
Ahg936962 | BTB-POZ and MATH domain 6 |
| 25.807 |
Ahg935879 | ENTH/ANTH/VHS superfamily protein |
| 30.7246 |
Ahg489969 | Adaptin family protein |
| 31.4643 |
Ahg491730 | vernalization5/VIN3-like |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|