Detail



ID : Ahg936962

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936962|scaffold_501153.1
Sequence
TCTGAGTGCT AAAATCCCAA ATGTCAAGGC TAATGACCAG ACCCAGCCGA TCATCAAGCC CCAATACGAA TCCAGATCGA ATCGAATCAC CAACAAGCTC AAGATCGGTG ACGCAGACGA CAAACGGATC GCACCAATTC GTGATCCAAG GATACAGTTT AGCTAAAGGA ATCGGAGTAG GGAAACACAT AGCAAGTGAT AATTTCTCCG TCGGAGGTTA TCAATGGACT ATCTTTGTCT ACCCAGATGG TAAAAATCCA GAAGATAACT CTTCTTACGT CTCTGTGTTC ATCGTTTTGG CTAGTGAAGG TACTGAAGTT AGAGCGCTTT TTGAGCTTGC TCTTGTTGAT CAAAGTGGTA AAGGGAAGCA TAAGGTTCAT AGCCATTTCG ATCGGTCGCT TGATGGTGGT CCTTACACGC TTAAATATAG AGGAAGTATG TGGGGATACA AGCGTTTCTT CAGACGTTCC TTGCTTGAGA CATCTGACTA CCTTAAAGAC GATTGCTTGA AAATCAATTG TACAGTTGGA GTTGTCGTTT CAGAAATACA TTGCCCACGA TTACTCTCGA TTCATGTCCC AGACTCAGAA CTTGGATCAC ATTTTGGAAA GTTGCTGGAT ACTTTAGAAG GTTCAGATGT CACATTTGAC ATTGCTGGTG AGAAGTTTCA AGCTCATAAA TTGGTTTTGG CTGCACGATC TCAGTTTTTC AGATCGAAGT TTTACAATGT CCCAGAAGCA AACAACAACG AGGTAGCGAT CAGCAATTTG GAACCTAAGG TTTTCAAGGC CTTGTTACAC TTCATGTATA AAGATTCTCT CCCAGGAGAT GTGGAACCAG TAACGGCTCA TTCATTTGAC CTATTAAGGC TGTCCGAAAT AGATGATACA CTGATTGTAA AGCTTCTGGC AGCTGCGGAA ATGTACAATC TGAGTAGGCT CAGATTATTG TGTGAATCTC ACATCTGCAA AGCCGTATCT ATCAGCTCCG TATCCAAGAT CTTAGCTTTA TCCGACAAAT ATAATGCAAC TGAACTAAAA AGCGTATCCC TAAAATTCAC TGCAGAAAAC CTAGCAGCTG TTCTGCAGAC AAAAGCTTAT GAAGATCTGA AGGATGACTA TCCAAACCTC CAGTCTGAGC TACTAAAGGC GGTGGCTGGT TATGACGAAA CAAGTAGCAG CGGAGGAGGA AAGTCTCAGA GTGTTTGGGC CCAACTCTCT GACGGTGGTG AGACCAGCAG CCGAAGAGTC AGGCAGCGAA CCACTTAGAA GAGCTTCTTC TTCACATGTT G 
Length1291
Protein Sequence
Protein Residue
Map Locationscaffold_5: 9792857.. 9795138
Download Sequence
A.thaliana
AGI-codeAT3G43700.1
DescriptionBTB-POZ and MATH domain 6
TAIR curator summary
Alias[ATBPM6][BPM6][BTB-POZ AND MATH DOMAIN 6][BTB-POZ and MATH domain 6]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg485482 VPS35 homolog C
8.83176 Ahg943524 CTP synthase family protein
10.5357 Ahg473738
21.0713 Ahg490975 Vacuolar sorting protein 39
25.923 Ahg948327 cullin4
28.9828 Ahg324433 O-acetylserine (thiol) lyase isoform C
31.1769 Ahg330667
39.5601 Ahg479664 DNA binding
42.8952 Ahg485258 RNA polymerase III subunit RPC82 family protein
44.238 Ahg485819 GRAS family transcription factor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression