Detail



ID : Ahg491004

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491004|fgenesh2_kg.7__437__AT4G36280.1
Sequence
TCTAGTCTTA TCGGAGAAGA CGATGCCTCG TATGGCGGAA AATGCAGCAG TCGCTGATGT TGTTCATCTC GACAGTGATA GTGACAGTGA CGACGGAGTA GGAGGAAGAG AATCAGCAAG TACAATCGCT GATGCTGCGA CGGTGGCTCC TACGGAATGC CGGAGCTTTT GGAAAGCCGG AGAAAACTTT GTGATACCGA TCGTTGTGAC TCCGACTTCT CCAGGTTTGC TTGAGCATGC TCGAGTTCAT CCCAGGTTTC TTCACTCGAA TGCTACTTCA CACAAATGGG CTTTTGGAGC AATCGCTGAG CTACTTGACA ATGCTGTTGA CGAGATACAA AATGGTGCTA CGTTTGTTAA GATTGATAAG ATCAATATTG TCAAAGATAA TTCCCCAGCT TTACTTTTCC AAGATGATGG CGGTGGGATG GATCCCGCTG GGCTCAGAAA ATGCATGAGC TTAGGCTACT CATCAAAGAA GTCTAATACA ACAATTGGAC AGTATGGAAA TGGTTTCAAA ACAAGTACCA TGAGACTTGG AGCTGATGCC ATTGTTTTTA GTCGCTCAAC TCGTGGAGGC ACATCTACTC AGAGTGTTGG TCTTCTGTCA TACACATTCC TCAGAAAAAC TGGTCAGGAT GATGTCATTG TTCCTATGAT TGATTTTGAT ATATCCAAGG AGCGACCACA ACCAATTATC TATGGATCTC AAGAAGATTG GGCTGCCAAC CTTGAAATTC TACTCAAATG GTCTCCGTTT TCTACAGAAG ACGAACTTTT ACAACAGCAG TTCGAGGACG TTGGAACTCA TGGAACAAAA GTAATTATAT ACAACTTGTG GCTTAATGAT GAAGGAATCT ATGAGCTGAG TTTTGACGAC GACGACGAGG ACATCCGGCT CCGAGATGAA AGTGTCAATG ACGGTAAACG GTTGCACCAT AAGTTATTGG AACTGAGATC TCATATTTCA TACCACTTAC GTTACTCTCT GAGGGCTTAT GCTTCAATGT TATATCTCAA AAAGTTCAAA AACTTCAAAA TTATAATTCG GGGAATCCCT GTGGAGCAGT TCAACATTGC TGATGAATTT AGATTTCTCG AGATTATAAA GTACAAGCCC CATACAGCTA CAATGGAACA AGCTTCCACT GAAATCAAAG TTGGATTTGT AAAGGAGGCG CCTAAGCTTG CAATTTGCGG TTTCAATGTC TATCACAAAA ACCGTCTCAT CCGGCCTTTC TGGAAGGTCA CTATGGGAGG GGACTCGACA GGCAATGGTG TTGTGGGAGT TCTTGAAGCA AACTTCATAG AACCAGCCCA TGATAAGCAA GATTTTGAAA GGTCTTCTCT ATTTCAGCGG CTGGAGGCGA GGTTGAAAAA GATTGTCTAT AGTTACTGGT ATACCCACTG CCACGTTTTT GGATACCATA CTTATCAAAT GCCTGCAGAT AAGTCGAAAA AGATAGCAAT ACCTGATCAA CTGCCTACTG TCAATACATT CAATCCTTCG CCTTTGCCTT CTGATAAAAT AAGTCAAGGT GGTCCTATCA TACATGAAAT CAATCTTAGT AACGCCACTT CAAGCCGTAC AGTTGCTGTT GCAGCGCCAC ATATGAGAAA TTCCATGGGT TTAAGAAGTA ACTTCCAACC TGTGCAGCTC AACCCACAAC CTGCGGCTGC TGATACTGGA AACACCCTCG TTGGCAAGTC CGCGGGTGAG ATCAGCGAAG AGAACTTGCG ACTCTTCATG AGGTGCGAGG AATATATAAA GAAAGAGAAT GAAATAGAAC AGACGGTAAA GAGCTTAGAA AAAGAACTGG AAGAAGTTAA AAGTAAATGT GCACAACTTG CTCTGCTTGT GGATGCTAAG AAGAAGGAGA TGCAACAAGT TTAGTAAAAG CGTTACGAGT TAAAACTCTC TGGAATCTAA AGAACCCTAG TTTGATTCAG 
Length1950
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1777781.. 1781722
Download Sequence
A.thaliana
AGI-codeAT4G36280.1
DescriptionHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
TAIR curator summary
Alias[CRH1][CRT1 Homologue 1]
Gene coexpression
MR
MR Locus Description
6.40312 Ahg474995
9.05539 Ahg894258 DOMAIN OF UNKNOWN FUNCTION 724 8
15.8114 Ahg311338 translocon at the outer envelope membrane of chloroplasts 33
23.5584 Ahg487232 3'-phosphoinositide-dependent protein kinase 1
31.4166 Ahg479064 RAB GTPase homolog G3C
37.2425 Ahg470137 TRICHOME BIREFRINGENCE-LIKE 25
48.5283 Ahg317213 dicer-like 2
49.7996 Ahg495004 PAS domain-containing protein tyrosine kinase family protein
49.96 Ahg928584 plastid transcriptionally active 13
50.6458 Ahg944085 GRAS family transcription factor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression