Detail



ID : Ahg894258

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894258|Al_scaffold_0006_2254
Sequence
ATGAGGTACT GTGGGAGTGG AATGCCTTCC ATGGAGGAAG GTTGTGAATT CGAAATCTCT TACAGAATGG ATCCGACATC TCTTCGTATT ATGTCTACAT GTATCTTAGA AGACATTCGG TACAAAGCTA TTGTCGTGGC AAAACCTCCC AAGAATCCCA AATCTAGACG CAGTGTACTC TGTGTTCGGT TGCTTAAGGA TGACTTTTCG ACTCCTCTTA ACGACCACAC CTTCAAAGTC TTGCGTCGAC CGATTCCGCC GACACATTCG CTAGATTGCA TTCCTATCAA GATAGGCTGC ATCGTTGAAG CTGATTATAA ATATGCGTGG GTCACTGGTT TTGTGGTCAA AGAGATTGAT GATTACAAGT GTTTGGTGTG TTTTTATTCA CCACCTGATA TTATTCACTT TGAGAGAAAG CTTTTGAGGC CTTATCTTGA GTGGCTTGGT GAGAGGAGAG ACCCAGGTTG GTTCGGAACA TCACGGCGTA ATGAAAAGTT CTTGAGGCGG TTAGCTGAGG AGCCTATGTT TAGTCCCGGA ACAATGGTGG AAGTGAGTTC TAAGATAAAT GAAACTGAAG TCGTTTGGGT TCCTGCAATG TCCTTGAGCT GCAAGAGTAG TAAGTCAGAA CCCAACAAAA TCGTTGATTT GCGTAGTCTT AGGCCTACAC CGCCTTCTAT TTCGATTGAT GAGTATCAAT CGGAGGAATA CGTAGAGGTG TTTCATGGTG GTATGGGATG GCGTCAAGGA CGAGTGATGG GAACTCTCTC TCAGAAATTG TATACAGTGC TTTTAGAGGC TACAAAGAAA GAATTGGTAT TCAAACACTC GGATCTTAGG CCTTTGAAGG TTTGGGAAGA TGGCATTTGG AAGATGTTGC AGACAAGGGA ATCGCCGTTA ACTCAGAAAT CAGGATATAA GATGAGTGAT TCAGTGATGA ATGCAAATGA ATCTGATCCA CCTGTAACTC CACCTCCGGG CATAACTATA ACACCGTTGA AACAAGAAGA GGCTGAAACT CAAAGAAAGA CATTCCCCAA GAAGACACTT CCAAGGAATC AGAATGGTTC AGGAAACGAT TCAACACGAG AGAATGAAAA TATCGAAGAT GTTAATCGAA AGAGGAAAAG AGAAGAAAAC CTTTGTTCTG ATGCTAGTGC TGAGGAAGAC AAAGCAAAGG ATACAAGAAT GGTTTTGCCC TTTGAGAAGA AGTTACGAAT TTGGAAGACA CTAGAATCAA TGGAGGTGTT TAAAACAGTC CCACAAAGTC CTCATTTCAG CCCATTGGTG GAGAGTAGAG AAGATTCCCG TGAAATGTCT GCGGTTGGTA TGATGCTTAC CTTTTCTGGT TTACTTGATG AAGTCAAAGC TCTGCAACAC GATGATCCCA TAAGCTCATT CGATAGCCTT AATGATTCCT TTTCCAAGTT AGAGAAACAC GGGCTCAATG TAAAAGTACC TCAGTTACGG CTCAATAAGC TGTTGTCTCT CAGAGATAGA CAATCAATGA AAACAGAGGA ACTCAAAGGT GCCGAGAAAG TGACGGCAGA GAAAGAGAGC GTAAAGGCTG AGAACGAGCG CAAGATTCTC GAGCTGCAGA GGCTGAATGA GGAGATGGAC AAAGAGATAG CTCAAAGTAA GTCATGTGCA ACAAAGATTG TCCAACAGCT TGATGATGTG AAGCTTGAGT TTAAGGCAAC TGCATCAGCT CCATGGTAA 
Length1719
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9670635.. 9673222
Download Sequence
A.thaliana
AGI-codeAT5G23770.2
DescriptionDOMAIN OF UNKNOWN FUNCTION 724 8
TAIR curator summaryMember of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype
Alias[ATDUF8][DUF8][DOMAIN OF UNKNOWN FUNCTION 724 8]
Gene coexpression
MR
MR Locus Description
9.05539 Ahg491004 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
24.4336 Ahg917379
36.7831 Ahg934121 Tetratricopeptide repeat (TPR)-like superfamily protein
41.6653 Ahg475974 NAD(P)-binding Rossmann-fold superfamily protein
46.9042 Ahg484593 nodulin MtN21 /EamA-like transporter family protein
50.6162 Ahg492400 CRT (chloroquine-resistance transporter)-like transporter 2
55.9375 Ahg899401 xylulose kinase-1
57.2713 Ahg938548
57.7321 Ahg494125 Rhomboid-related intramembrane serine protease family protein
60.3738 Ahg949280 Protein of unknown function (DUF760)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression