Detail



ID : Ahg495004

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495004|fgenesh2_kg.8__820__AT5G49470.2
Sequence
AAAGATAAGC ACAGAAGTTT TCCTTCATTG TTGACTCTCT CCAGATTCTG TTTCTTCTTC TTCTTCCTAA ATCCATCTCT CAAGCTTTTT CCACCATTTT CGCCGTGATT CAGCTTCACC GATTCAAACT CAGATTTGAT CTCCGTTGAT TAGATTTGAC TGCGTTTTTT TTTCGCAATG GAGAAGACGA CTCCACCAGC GGAGGAGCTT CTTAAGAAGA TACGAGAGTT AGAAGAAAGC CAAGAGCATC TAAAGCGAGA GATGTCGCGA CTTAAAGTAT CGGCGGAGAT GAAGCAGCGT TCGCATTCAG CGTCGCCGCA ACGTCCTGTG AGGAGAAATA GTGGAGACGG AACTCCGATG TGGAGAAAAA GCGGTGCGGC TTCGTTTCGT CATGCTTCGC CGTTGCGGAA GGAGAGCCAT GCGAAAGTTG CTGGAGCTGG TGGCGGTGAC GGCGAGGGAC AATCGGCAGG CAAGTTCACC GATAAACAGT ATTTGAATAT TTTGCAGTCT ATGGCTCAAG CTGTTCATGT CTTCGATCTA AATGGCCAAA TTATCTTTTG GAACTCAATG GCGGAAAGGC TTTATGGATT CTCAGCTGCT GAAGCACTTG GGAAGGATCC GATTGATATT CTTGTAGATG GTCAGGATGC TTCGGTTGCA CAGAATATCA CTCGGCGTTG CAGTAGTGGA GAGAGTTGGA CTGGTGAGTT TCCTGTCAAG AACAAAGCCG GAGAGAGGTT TTCAGTTGTG ACTACGATGT CTCCTTCATA TGATGATGAT GGTTCTCTTA TTGGGATCAT ATGTATCACA AATGATTCGG CACTCTTTCA AGACCCGAGA GGCTCTCCGG CTAAGACAAG GGGGCAAGAA GGGGAGACGA GCTTTAGCCG GGTGACTAGT AGTGTTGCAT CTAAGCTTGG TCTTGACTCG AAAGAGGCTG TTGTATCGAA ACTCGGCCTT GATTCTCAGC AGCCTATACA AGTTGCTATA GCTTCAAAGA TATCAGATTT GGTGGGCAAC AAGGTCAAGT CAAAAATGCG AGCAGGTGAT AATAATGCTG CAAATCTTGA GGGTGGAAGT GGGGACAGTC ATCAGTCCGA TCAGGGGTTC TTTGATGCTA CCTTCTCTGA CCGGAGGGAG GATGCAGCAA CAAGTGGTGC TGATACACCT AGGGGGGATT TTATCCAATC TCCATTTGGT GTATTCTTAC GTAGCGATGA GAAGGCTTCT TCAAAGCCGT TCAGAGATTC CAGTGATGAA AATGACGGAA ACTCTGTTAT CCCTAAAACA CTGACCTCAA AAGCTGAAGA GTGGATGGTA AAGAAAGGAT TATCATGGCC GTGGAAAGGG AATGAAAGGG AAGGTTCGGA AGGAAGGCGT AGTCATTCTG TGTGGCCTTG GATGCAGAAT GAACAACATA AAGAACAGGC ATATCAAAGT AATTCTAATC ACAGTGTTAA GTCTGAAAGC CAGGCATGTG AAAGTATTAA GGCTTCCAGT AACGAGCCTA TGGGGTATTG GTCTTCCTCT GTTAATGTGA ACAGCACAAG CAGTAGTAGC AGCTGTGGAA GTACCAGCAG CAGTGTTATG AACAAGGTCG ATATGGATAG TGACTGCTTG GATTATGAAA TCTTATGGGA TGACTTGACA ATTGGAGAAC AAATCGGGCA AGGTTCATGC GGAACTGTTT ATCACGGTCT GTGGTTTGGA TCTGATGTGG CTGTAAAGGT GTTTTCCAAA CAAGAATATT CAGAAGAGAT CATAACATCT TTTAGACAAG AGGTATCATT GATGAAAAGA CTTCGACACC CGAACGTTTT GCTATTTATG GGAGCTGTGA CATCGCCTCA GCGTCTCTGT ATAGTAACAG AGTTCCTTCC ACGGTTCGGT CTCATCTCTT TGGCTAATAG TACACGTCCT TTTTTGCTTT TTAAAATCCG GGGCCAAAAC TCTGACTCAC CCCTAAATTT ATCAAATAAC ATATGCAGTG GAAGTCTCTT CCGGTTGCTG CAGAGGAACA CGTCAAAACT GGATTGGAGG CGACGTATCC ATATGGCCTC GGACATTGTG AGTATTACTC ACACACGGAT TTTCCAGTTG TCTGCTCTTT TTTTGTTCTT ACTTGCATCT GTCTTGCATA TCATTCTTTT CCCTTCTTTG ATTCAGCCAC TGTATCTCTT CTACAACATG TTACATATAT TTCTTACATA CGTCTTCCCA CAGGCTCGTG GCATGAATTA TCTTCACCAT TGTACTCCAC CCATCATTCA CCGAGATCTG AAGTCGTCAA ATCTACTGGT TGATCGAAAC TGGACCGTGA AGGTTGCTGA TTTTGGTCTT TCGCGTATCA AGCATGAGAC ATACCTCACT ACAAAGACTG GAAGGGGAAC GCCTCAATGG ATGGCACCAG AAGTTCTTCG AAATGAGGCT GCTGATGAAA AGTCCGACGT TTACAGCTTT GGAGTAATAC TATGGGAGCT TGTGACTGAG AAGATCCCGT GGGAAAATCT AAATCCCATG CAGGTGATTG GAGCTGTGGG GTTCATGAAC CAGAGGCTGG AAGTCCCGAA GAATGTTGAT CCTCAGTGGA TTTCTTTAAT GGAAAGCTGC TGGCATAGTG AACCGCAGCA CAGACCATCG TTTCAAGAAA TCATGGAGAA ACTAAGAGAG CTTCAAAGAA AGTACACAAT ACAGTTCCAG GCGGCTCGTG CTGCATCAAT AGAAAACTCT GCCCTCAAGG AAAAATAAAC CATTAAATGG ACAGAGCTAA AACTGATTAT GCGTTGATGA AGCTGAGCTA CATAAGCAAA GCAGAAAGGT GTTTTGTGTT TGTGTTGAAG CGCAATGACG AGAAAGCACC AACAAGAAAG AGTTTTGGTA TATGCGAATA TATTCTCTCT GATTACAAGA GCCATTCTTT TGTATGGAAT TGATTCTGAA AACGTCATGT GCTTGCTAGG CGAGCTAGAG AGGTTATTTA TATAAAACCA TTATGCCTGA TACAGACCCA ATTTTTTAAA GAATAGTCTG TACAGGTAAA AGTATGAGAT AGAATCAAGA TTTGGACAGT GATTTTGAGT AAATATTGCC ACTTTT 
Length3096
Protein Sequence
Protein Residue
Map Locationscaffold_8: 12407080.. 12412725
Download Sequence
A.thaliana
AGI-codeAT5G49470.2
DescriptionPAS domain-containing protein tyrosine kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg943535 MUTS homolog 6
1.41421 Ahg476612 Pentatricopeptide repeat (PPR) superfamily protein
2.82843 Ahg480210 OBP3-responsive gene 4
3.4641 Ahg892659 MEI2-like 4
3.4641 Ahg482239
10.9545 Ahg488740 GTP1/OBG family protein
13.0384 Ahg489028 5'-AMP-activated protein kinase beta-2 subunit protein
18.3303 Ahg483691 WD-40 repeat family protein / beige-related
19.975 Ahg494823 P-loop containing nucleoside triphosphate hydrolases superfamily protein
22.3607 Ahg496533 nuclear factor Y, subunit C4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression